Transcription factor | NFKB2 (GeneCards) | ||||||||
Model | NFKB2_HUMAN.H11MO.0.B | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 11 | ||||||||
Quality | B | ||||||||
Motif rank | 0 | ||||||||
Consensus | KGGRAAdYCCC | ||||||||
Best auROC (human) | 0.977 | ||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | 4 | ||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 500 | ||||||||
TF family | NF-kappaB-related factors {6.1.1} | ||||||||
TF subfamily | NF-kappaB p50 subunit-like factors {6.1.1.1} | ||||||||
HGNC | HGNC:7795 | ||||||||
EntrezGene | GeneID:4791 (SSTAR profile) | ||||||||
UniProt ID | NFKB2_HUMAN | ||||||||
UniProt AC | Q00653 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | NFKB2 expression | ||||||||
ReMap ChIP-seq dataset list | NFKB2 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 59.0 | 26.0 | 333.0 | 82.0 |
02 | 32.0 | 1.0 | 459.0 | 8.0 |
03 | 21.0 | 1.0 | 463.0 | 15.0 |
04 | 272.0 | 2.0 | 210.0 | 16.0 |
05 | 406.0 | 39.0 | 54.0 | 1.0 |
06 | 486.0 | 4.0 | 6.0 | 4.0 |
07 | 93.0 | 61.0 | 229.0 | 117.0 |
08 | 44.0 | 236.0 | 14.0 | 206.0 |
09 | 66.0 | 434.0 | 0.0 | 0.0 |
10 | 1.0 | 488.0 | 1.0 | 10.0 |
11 | 49.0 | 418.0 | 10.0 | 23.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.737 | -1.525 | 0.972 | -0.415 |
02 | -1.328 | -3.903 | 1.292 | -2.584 |
03 | -1.725 | -3.903 | 1.3 | -2.034 |
04 | 0.771 | -3.573 | 0.514 | -1.975 |
05 | 1.17 | -1.138 | -0.823 | -3.903 |
06 | 1.349 | -3.126 | -2.819 | -3.126 |
07 | -0.291 | -0.705 | 0.6 | -0.065 |
08 | -1.022 | 0.63 | -2.096 | 0.495 |
09 | -0.628 | 1.236 | -4.4 | -4.4 |
10 | -3.903 | 1.353 | -3.903 | -2.394 |
11 | -0.918 | 1.199 | -2.394 | -1.64 |