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Model info
Transcription factorNFYA
(GeneCards)
ModelNFYA_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnbbRRCCAATvRvMRn
Best auROC (human)0.984
Best auROC (mouse)0.961
Peak sets in benchmark (human)19
Peak sets in benchmark (mouse)14
Aligned words507
TF familyHeteromeric CCAAT-binding factors {4.2.1}
TF subfamilyNF-YA (CP1A, CBF-B) {4.2.1.0.1}
HGNCHGNC:7804
EntrezGeneGeneID:4800
(SSTAR profile)
UniProt IDNFYA_HUMAN
UniProt ACP23511
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.51986
0.0005 10.00881
0.0001 15.33616
GTEx tissue expression atlas NFYA expression
ReMap ChIP-seq dataset list NFYA datasets
Motifs in JASPAR
MA0060.1 (NFYA; Mus musculus/Rattus norvegicus/Xenopus laevis/Xenopus (Silurana) tropicalis/Gallus gallus/Homo sapiens/Bos taurus/Oryctolagus cuniculus)
MA0060.2 (NFYA; Homo sapiens)
MA0060.3 (NFYA; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0116.053.045.043.011.026.018.058.023.037.027.036.010.042.015.040.0
026.031.012.011.018.036.016.088.08.045.014.038.025.080.021.051.0
0319.01.036.01.0141.017.026.08.032.04.027.00.066.020.094.08.0
0470.00.0169.019.023.00.015.04.081.02.058.042.07.00.06.04.0
051.0179.00.01.00.02.00.00.01.0246.00.01.00.069.00.00.0
060.02.00.00.03.0490.01.02.00.00.00.00.00.01.00.01.0
073.00.00.00.0493.00.00.00.01.00.00.00.03.00.00.00.0
08492.01.07.00.00.00.00.00.00.00.00.00.00.00.00.00.0
093.09.02.0478.00.00.00.01.00.01.01.05.00.00.00.00.0
100.00.02.01.01.08.00.01.00.00.02.01.094.0263.0111.016.0
1130.01.064.00.0210.021.036.04.075.01.039.00.013.02.04.00.0
1263.058.0193.014.05.06.09.05.034.023.075.011.03.00.01.00.0
1356.024.019.06.048.019.08.012.0172.061.030.015.015.08.05.02.0
14145.012.0111.023.039.01.055.017.034.04.010.014.09.00.021.05.0
1545.055.096.031.06.04.03.04.044.072.052.029.012.08.020.019.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.6580.5230.3610.316-1.022-0.181-0.5430.613-0.3020.167-0.1440.14-1.1140.293-0.7210.244
02-1.6-0.008-0.938-1.022-0.5430.14-0.6581.027-1.3280.361-0.7880.193-0.220.932-0.3920.485
03-0.49-3.1260.14-3.1261.497-0.599-0.181-1.3280.023-1.975-0.144-4.40.741-0.4391.093-1.328
040.8-4.41.678-0.49-0.302-4.4-0.721-1.9750.945-2.5840.6130.293-1.454-4.4-1.6-1.975
05-3.1261.735-4.4-3.126-4.4-2.584-4.4-4.4-3.1262.053-4.4-3.126-4.40.785-4.4-4.4
06-4.4-2.584-4.4-4.4-2.2342.741-3.126-2.584-4.4-4.4-4.4-4.4-4.4-3.126-4.4-3.126
07-2.234-4.4-4.4-4.42.747-4.4-4.4-4.4-3.126-4.4-4.4-4.4-2.234-4.4-4.4-4.4
082.745-3.126-1.454-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4
09-2.234-1.215-2.5842.716-4.4-4.4-4.4-3.126-4.4-3.126-3.126-1.77-4.4-4.4-4.4-4.4
10-4.4-4.4-2.584-3.126-3.126-1.328-4.4-3.126-4.4-4.4-2.584-3.1261.0932.1191.259-0.658
11-0.04-3.1260.711-4.41.895-0.3920.14-1.9750.868-3.1260.219-4.4-0.86-2.584-1.975-4.4
120.6950.6131.81-0.788-1.77-1.6-1.215-1.770.083-0.3020.868-1.022-2.234-4.4-3.126-4.4
130.578-0.26-0.49-1.60.425-0.49-1.328-0.9381.6950.663-0.04-0.721-0.721-1.328-1.77-2.584
141.525-0.9381.259-0.3020.219-3.1260.56-0.5990.083-1.975-1.114-0.788-1.215-4.4-0.392-1.77
150.3610.561.114-0.008-1.6-1.975-2.234-1.9750.3390.8280.504-0.074-0.938-1.328-0.439-0.49