We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNFYB
(GeneCards)
ModelNFYB_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
A
Motif rank
0
ConsensusbRRCCAATSRSvd
Best auROC (human)0.987
Best auROC (mouse)0.997
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)4
Aligned words1163
TF familyHeteromeric CCAAT-binding factors {4.2.1}
TF subfamilyNF-YB (CP1B, CBF-A) {4.2.1.0.2}
HGNCHGNC:7805
EntrezGeneGeneID:4801
(SSTAR profile)
UniProt IDNFYB_HUMAN
UniProt ACP25208
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.619115
0.0005 4.89301
0.0001 7.535110000000001
GTEx tissue expression atlas NFYB expression
ReMap ChIP-seq dataset list NFYB datasets
Motifs in JASPAR
PCM
ACGT
01144.512530.746184.341288.24
02659.78545.592412.03530.426
03339.79253.682653.627100.737
040.7991140.1965.4991.344
051.3561138.1766.821.487
061139.9217.320.00.598
071134.8859.3713.4950.088
084.4235.2876.7641131.365
0959.598656.457384.39247.392
10741.73952.507340.19113.402
11139.626194.231755.35858.624
12513.993338.143232.6363.073
13358.001122.157509.809157.872
PWM
ACGT
01-0.680.612-0.4390.004
020.829-1.8080.36-2.194
030.168-1.650.82-1.036
04-4.7251.375-3.683-4.532
05-4.5291.373-3.516-4.487
061.375-3.459-5.099-4.807
071.37-3.256-4.006-5.051
08-3.843-3.713-3.5221.367
09-1.5490.8240.291-1.771
100.946-1.6720.169-2.947
11-0.714-0.3870.964-1.565
120.580.163-0.208-1.494
130.22-0.8460.572-0.593