We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNFYC
(GeneCards)
ModelNFYC_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusbRvSYMATvRvvvnvvnv
Best auROC (human)0.946
Best auROC (mouse)0.979
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)4
Aligned words500
TF familyHeteromeric CCAAT-binding factors {4.2.1}
TF subfamilyNF-YC {4.2.1.0.3}
HGNCHGNC:7806
EntrezGeneGeneID:4802
(SSTAR profile)
UniProt IDNFYC_HUMAN
UniProt ACQ13952
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.82076
0.0005 9.42306
0.0001 12.76026
GTEx tissue expression atlas NFYC expression
ReMap ChIP-seq dataset list NFYC datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0142.02.010.00.099.05.042.05.0120.04.017.04.071.012.063.04.0
0271.0126.0116.019.013.02.05.03.036.043.036.017.04.06.03.00.0
034.0106.08.06.09.026.0140.02.01.0149.09.01.03.030.04.02.0
043.02.02.010.04.0295.03.09.06.028.09.0118.02.08.00.01.0
059.06.00.00.0317.010.00.06.09.04.00.01.017.0116.04.01.0
06346.03.02.01.0134.01.01.00.03.01.00.00.07.00.00.01.0
0712.047.015.0416.00.01.00.04.00.00.00.03.00.01.01.00.0
083.07.00.02.08.022.05.014.02.011.01.02.050.0254.080.039.0
0928.02.030.03.0188.036.059.011.045.00.035.06.018.06.017.016.0
1040.052.0168.019.011.08.019.06.023.040.067.011.04.019.08.05.0
1146.017.010.05.040.031.028.020.0112.078.055.017.015.011.04.011.0
12100.027.072.014.029.018.081.09.041.026.023.07.013.015.025.00.0
1330.045.076.032.015.029.020.022.049.078.042.032.04.05.07.014.0
1412.018.060.08.014.028.094.021.024.055.050.016.015.015.055.015.0
1515.019.027.04.016.048.031.021.038.0180.030.011.07.024.023.06.0
1623.013.036.04.033.018.0179.041.029.023.049.010.05.05.028.04.0
1721.018.050.01.06.021.020.012.076.0135.054.027.010.033.09.07.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.293-2.584-1.114-4.41.145-1.770.293-1.771.336-1.975-0.599-1.9750.814-0.9380.695-1.975
020.8141.3851.303-0.49-0.86-2.584-1.77-2.2340.140.3160.14-0.599-1.975-1.6-2.234-4.4
03-1.9751.213-1.328-1.6-1.215-0.1811.49-2.584-3.1261.552-1.215-3.126-2.234-0.04-1.975-2.584
04-2.234-2.584-2.584-1.114-1.9752.234-2.234-1.215-1.6-0.108-1.2151.32-2.584-1.328-4.4-3.126
05-1.215-1.6-4.4-4.42.306-1.114-4.4-1.6-1.215-1.975-4.4-3.126-0.5991.303-1.975-3.126
062.393-2.234-2.584-3.1261.446-3.126-3.126-4.4-2.234-3.126-4.4-4.4-1.454-4.4-4.4-3.126
07-0.9380.404-0.7212.577-4.4-3.126-4.4-1.975-4.4-4.4-4.4-2.234-4.4-3.126-3.126-4.4
08-2.234-1.454-4.4-2.584-1.328-0.346-1.77-0.788-2.584-1.022-3.126-2.5840.4652.0840.9320.219
09-0.108-2.584-0.04-2.2341.7840.140.63-1.0220.361-4.40.112-1.6-0.543-1.6-0.599-0.658
100.2440.5041.672-0.49-1.022-1.328-0.49-1.6-0.3020.2440.756-1.022-1.975-0.49-1.328-1.77
110.383-0.599-1.114-1.770.244-0.008-0.108-0.4391.2680.9070.56-0.599-0.721-1.022-1.975-1.022
121.155-0.1440.828-0.788-0.074-0.5430.945-1.2150.269-0.181-0.302-1.454-0.86-0.721-0.22-4.4
13-0.040.3610.8810.023-0.721-0.074-0.439-0.3460.4450.9070.2930.023-1.975-1.77-1.454-0.788
14-0.938-0.5430.646-1.328-0.788-0.1081.093-0.392-0.260.560.465-0.658-0.721-0.7210.56-0.721
15-0.721-0.49-0.144-1.975-0.6580.425-0.008-0.3920.1931.741-0.04-1.022-1.454-0.26-0.302-1.6
16-0.302-0.860.14-1.9750.054-0.5431.7350.269-0.074-0.3020.445-1.114-1.77-1.77-0.108-1.975
17-0.392-0.5430.465-3.126-1.6-0.392-0.439-0.9380.8811.4540.542-0.144-1.1140.054-1.215-1.454