We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNFYC
(GeneCards)
ModelNFYC_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusbbvdCCAATvRvvd
Best auROC (human)0.866
Best auROC (mouse)0.984
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)4
Aligned words427
TF familyHeteromeric CCAAT-binding factors {4.2.1}
TF subfamilyNF-YC {4.2.1.0.3}
HGNCHGNC:7806
EntrezGeneGeneID:4802
(SSTAR profile)
UniProt IDNFYC_HUMAN
UniProt ACQ13952
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.04551
0.0005 5.90456
0.0001 7.654310000000001
GTEx tissue expression atlas NFYC expression
ReMap ChIP-seq dataset list NFYC datasets
Motifs in JASPAR
PCM
ACGT
0160.0144.084.0138.0
0236.0154.081.0155.0
03203.043.0142.038.0
04135.029.0206.056.0
052.0401.012.011.0
068.0414.03.01.0
07395.011.04.016.0
08386.017.020.03.0
0912.023.08.0383.0
1054.0226.0110.036.0
11261.037.0117.011.0
1274.066.0241.045.0
13191.0111.080.044.0
14152.036.0169.069.0
PWM
ACGT
01-0.5630.298-0.2340.256
02-1.0580.364-0.2690.371
030.638-0.8860.284-1.006
040.234-1.2640.653-0.63
05-3.4261.315-2.079-2.155
06-2.431.347-3.175-3.761
071.3-2.155-2.975-1.819
081.277-1.764-1.614-3.175
09-2.079-1.483-2.431.27
10-0.6660.7450.032-1.058
110.888-1.0310.093-2.155
12-0.358-0.470.809-0.843
130.5780.041-0.281-0.864
140.352-1.0580.457-0.426