We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNfyc
ModelNFYC_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusnnbbRRCCAATSASvRn
Best auROC (human)0.844
Best auROC (mouse)0.989
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)4
Aligned words507
TF familyHeteromeric CCAAT-binding factors {4.2.1}
TF subfamilyNF-YC {4.2.1.0.3}
MGIMGI:107901
EntrezGeneGeneID:18046
(SSTAR profile)
UniProt IDNFYC_MOUSE
UniProt ACP70353
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.21541
0.0005 9.026510000000002
0.0001 14.83971
GTEx tissue expression atlas Nfyc expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0150.013.028.016.068.028.036.044.029.022.021.010.038.035.029.032.0
0219.060.038.068.010.018.020.050.019.051.019.025.011.042.09.040.0
035.035.07.012.011.051.017.092.08.036.019.023.014.075.027.067.0
0421.03.014.00.0123.027.039.08.036.03.031.00.087.011.078.018.0
0568.08.0176.015.023.00.011.010.072.09.058.023.014.02.06.04.0
060.0177.00.00.00.019.00.00.00.0251.00.00.00.051.00.01.0
070.00.00.00.00.0494.02.02.00.00.00.00.00.01.00.00.0
080.00.00.00.0491.00.00.04.02.00.00.00.02.00.00.00.0
09494.00.01.00.00.00.00.00.00.00.00.00.04.00.00.00.0
100.06.00.0492.00.00.00.00.00.00.00.01.00.00.00.00.0
110.00.00.00.01.05.00.00.00.00.00.00.041.0309.0125.018.0
1215.02.024.01.0261.014.036.03.083.00.042.00.014.00.04.00.0
1354.052.0248.019.01.07.05.03.022.023.057.04.02.00.02.00.0
1443.021.013.02.035.09.026.012.0181.070.048.013.013.05.03.05.0
15122.010.0117.023.033.00.053.019.044.08.026.012.010.01.020.01.0
1633.060.080.036.09.04.05.01.045.073.053.045.012.08.020.015.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.467-0.858-0.106-0.6560.773-0.1060.1420.341-0.072-0.344-0.39-1.1120.1950.114-0.0720.025
02-0.4880.6480.1950.773-1.112-0.541-0.4370.467-0.4880.487-0.488-0.218-1.020.294-1.2130.246
03-1.7680.114-1.452-0.936-1.020.487-0.5971.074-1.3260.142-0.488-0.3-0.7860.87-0.1420.758
04-0.39-2.232-0.786-4.3981.363-0.1420.221-1.3260.142-2.232-0.006-4.3981.018-1.020.909-0.541
050.773-1.3261.72-0.719-0.3-4.398-1.02-1.1120.83-1.2130.615-0.3-0.786-2.582-1.598-1.973
06-4.3981.726-4.398-4.398-4.398-0.488-4.398-4.398-4.3982.075-4.398-4.398-4.3980.487-4.398-3.124
07-4.398-4.398-4.398-4.398-4.3982.751-2.582-2.582-4.398-4.398-4.398-4.398-4.398-3.124-4.398-4.398
08-4.398-4.398-4.398-4.3982.745-4.398-4.398-1.973-2.582-4.398-4.398-4.398-2.582-4.398-4.398-4.398
092.751-4.398-3.124-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-1.973-4.398-4.398-4.398
10-4.398-1.598-4.3982.747-4.398-4.398-4.398-4.398-4.398-4.398-4.398-3.124-4.398-4.398-4.398-4.398
11-4.398-4.398-4.398-4.398-3.124-1.768-4.398-4.398-4.398-4.398-4.398-4.3980.2712.2821.379-0.541
12-0.719-2.582-0.258-3.1242.114-0.7860.142-2.2320.971-4.3980.294-4.398-0.786-4.398-1.973-4.398
130.5440.5062.063-0.488-3.124-1.452-1.768-2.232-0.344-0.30.597-1.973-2.582-4.398-2.582-4.398
140.318-0.39-0.858-2.5820.114-1.213-0.179-0.9361.7480.8020.427-0.858-0.858-1.768-2.232-1.768
151.355-1.1121.313-0.30.056-4.3980.525-0.4880.341-1.326-0.179-0.936-1.112-3.124-0.437-3.124
160.0560.6480.9340.142-1.213-1.973-1.768-3.1240.3630.8430.5250.363-0.936-1.326-0.437-0.719