We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNkx6-1
ModelNKX61_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length22
Quality
A
Motif rank
0
ConsensusddRhdRAKKdbhdWWWRAWddn
Best auROC (human)0.435
Best auROC (mouse)0.975
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)8
Aligned words510
TF familyNK-related factors {3.1.2}
TF subfamilyNK-6 {3.1.2.19}
MGIMGI:1206039
EntrezGeneGeneID:18096
(SSTAR profile)
UniProt IDNKX61_MOUSE
UniProt ACQ99MA9
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.53931
0.0005 13.234210000000001
0.0001 16.73986
GTEx tissue expression atlas Nkx6-1 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0151.05.096.017.029.09.09.017.038.04.025.024.032.017.088.038.0
02106.017.020.07.012.012.00.011.0175.017.017.09.046.012.024.014.0
0370.065.030.0174.015.014.05.024.011.020.07.023.07.07.010.017.0
0440.09.015.039.046.01.06.053.017.08.04.023.039.010.046.0143.0
05105.011.016.010.020.01.04.03.044.04.019.04.0139.014.058.047.0
06299.01.04.04.030.00.00.00.092.01.01.03.061.01.02.00.0
0737.017.065.0363.00.00.01.02.00.00.02.05.00.00.02.05.0
081.05.016.015.03.01.03.010.08.024.011.027.013.025.0225.0112.0
093.00.016.06.024.02.08.021.097.021.091.046.035.014.082.033.0
1017.053.070.019.09.09.08.011.040.067.056.034.09.029.049.019.0
1120.020.09.026.056.026.07.069.056.054.027.046.021.019.017.026.0
1264.09.033.047.046.010.02.061.038.02.06.014.032.015.024.096.0
13104.03.06.067.011.02.00.023.026.00.04.035.054.010.00.0154.0
1498.04.015.078.03.01.00.011.03.00.02.05.046.08.010.0215.0
1529.014.06.0101.00.04.01.08.05.02.03.017.031.029.011.0238.0
1646.03.013.03.033.09.04.03.015.05.01.00.0252.049.054.09.0
17337.06.02.01.064.01.00.01.072.00.00.00.015.00.00.00.0
1859.031.025.0373.02.01.01.03.01.01.00.00.00.00.00.02.0
1914.09.016.023.013.02.013.05.00.01.05.020.045.018.0153.0162.0
2024.05.036.07.019.04.02.05.079.027.051.030.056.016.097.041.0
2135.053.054.036.024.012.02.014.049.038.047.052.021.018.031.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.487-1.7681.116-0.597-0.072-1.213-1.213-0.5970.195-1.973-0.218-0.2580.025-0.5971.0290.195
021.215-0.597-0.437-1.452-0.936-0.936-4.398-1.021.715-0.597-0.597-1.2130.385-0.936-0.258-0.786
030.8020.728-0.0381.709-0.719-0.786-1.768-0.258-1.02-0.437-1.452-0.3-1.452-1.452-1.112-0.597
040.246-1.213-0.7190.2210.385-3.124-1.5980.525-0.597-1.326-1.973-0.30.221-1.1120.3851.513
051.205-1.02-0.656-1.112-0.437-3.124-1.973-2.2320.341-1.973-0.488-1.9731.485-0.7860.6150.406
062.249-3.124-1.973-1.973-0.038-4.398-4.398-4.3981.074-3.124-3.124-2.2320.665-3.124-2.582-4.398
070.169-0.5970.7282.443-4.398-4.398-3.124-2.582-4.398-4.398-2.582-1.768-4.398-4.398-2.582-1.768
08-3.124-1.768-0.656-0.719-2.232-3.124-2.232-1.112-1.326-0.258-1.02-0.142-0.858-0.2181.9651.27
09-2.232-4.398-0.656-1.598-0.258-2.582-1.326-0.391.126-0.391.0630.3850.114-0.7860.9590.056
10-0.5970.5250.802-0.488-1.213-1.213-1.326-1.020.2460.7580.580.085-1.213-0.0720.447-0.488
11-0.437-0.437-1.213-0.1790.58-0.179-1.4520.7870.580.544-0.1420.385-0.39-0.488-0.597-0.179
120.713-1.2130.0560.4060.385-1.112-2.5820.6650.195-2.582-1.598-0.7860.025-0.719-0.2581.116
131.196-2.232-1.5980.758-1.02-2.582-4.398-0.3-0.179-4.398-1.9730.1140.544-1.112-4.3981.587
141.137-1.973-0.7190.909-2.232-3.124-4.398-1.02-2.232-4.398-2.582-1.7680.385-1.326-1.1121.92
15-0.072-0.786-1.5981.167-4.398-1.973-3.124-1.326-1.768-2.582-2.232-0.597-0.006-0.072-1.022.022
160.385-2.232-0.858-2.2320.056-1.213-1.973-2.232-0.719-1.768-3.124-4.3982.0790.4470.544-1.213
172.369-1.598-2.582-3.1240.713-3.124-4.398-3.1240.83-4.398-4.398-4.398-0.719-4.398-4.398-4.398
180.632-0.006-0.2182.47-2.582-3.124-3.124-2.232-3.124-3.124-4.398-4.398-4.398-4.398-4.398-2.582
19-0.786-1.213-0.656-0.3-0.858-2.582-0.858-1.768-4.398-3.124-1.768-0.4370.363-0.5411.5811.638
20-0.258-1.7680.142-1.452-0.488-1.973-2.582-1.7680.922-0.1420.487-0.0380.58-0.6561.1260.271
210.1140.5250.5440.142-0.258-0.936-2.582-0.7860.4470.1950.4060.506-0.39-0.541-0.006-0.858