We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNOBOX
(GeneCards)
ModelNOBOX_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
C
Motif rank
0
ConsensushTAATTGvb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words66
TF familyPaired-related HD factors {3.1.3}
TF subfamilyNOBOX {3.1.3.15}
HGNCHGNC:22448
EntrezGeneGeneID:135935
(SSTAR profile)
UniProt IDNOBOX_HUMAN
UniProt ACO60393
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.432779999999999
0.0005 6.46477
0.0001 7.910030000000001
GTEx tissue expression atlas NOBOX expression
ReMap ChIP-seq dataset list NOBOX datasets
Motifs in JASPAR
PCM
ACGT
0119.33221.8533.36221.772
020.00.00.066.319
0364.6380.00.01.681
0464.6381.6810.00.0
051.6811.6811.68161.276
061.6810.06.72457.914
0724.2910.042.0280.0
0812.52420.17429.4184.203
095.46417.98811.34731.52
PWM
ACGT
010.1450.262-1.3860.258
02-2.822-2.822-2.8221.341
031.315-2.822-2.822-1.865
041.315-1.865-2.822-2.822
05-1.865-1.865-1.8651.263
06-1.865-2.822-0.8191.207
070.363-2.8220.893-2.822
08-0.2610.1860.547-1.211
09-0.9960.077-0.3520.614