We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNOTO
(GeneCards)
ModelNOTO_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusvYTAATTWRnb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words26150
TF familyNK-related factors {3.1.2}
TF subfamilyNOTO {3.1.2.20}
HGNCHGNC:31839
EntrezGeneGeneID:344022
(SSTAR profile)
UniProt IDNOTO_HUMAN
UniProt ACA8MTQ0
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.442265
0.0005 6.469645
0.0001 8.250815
GTEx tissue expression atlas NOTO expression
ReMap ChIP-seq dataset list NOTO datasets
Motifs in JASPAR
PCM
ACGT
017314.754654.7510571.753303.75
021246.07143.01872.015584.0
03536.25558.25356.2524394.25
0425289.5131.5175.5248.5
0525705.7510.7569.7558.75
0614.2513.2554.2525763.25
07589.759.754720.7520524.75
0818234.0444.02935.04232.0
094211.751325.7519156.751150.75
105365.55142.58220.57116.5
113105.755128.754000.7513609.75
PWM
ACGT
010.124-0.3280.492-0.67
02-1.6440.1-1.2380.88
03-2.485-2.445-2.8911.328
041.364-3.876-3.592-3.248
051.381-6.187-4.493-4.658
06-5.953-6.015-4.7351.383
07-2.39-6.265-0.3141.156
081.037-2.672-0.789-0.423
09-0.428-1.5821.087-1.724
10-0.186-0.2280.2410.097
11-0.732-0.231-0.4790.745