We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNR0B1
(GeneCards)
ModelNR0B1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
0
ConsensusSCGKGGRASA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words9
TF familyDAX-related receptors (NR0) {2.1.7}
TF subfamilyDAX1 (NR0B1) {2.1.7.0.1}
HGNCHGNC:7960
EntrezGeneGeneID:190
(SSTAR profile)
UniProt IDNR0B1_HUMAN
UniProt ACP51843
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.450699999999999
0.0005 5.032115
0.0001 6.125775
GTEx tissue expression atlas NR0B1 expression
ReMap ChIP-seq dataset list NR0B1 datasets
Motifs in JASPAR
PCM
ACGT
010.2072.225.5361.036
023.0795.9210.00.0
030.9470.08.0530.0
041.0660.03.1974.737
050.00.09.00.0
060.01.7767.2240.0
071.8950.06.1580.947
086.8681.0661.0660.0
091.7763.3163.9080.0
105.0920.03.9080.0
PWM
ACGT
01-1.308-0.0110.777-0.568
020.2590.838-1.628-1.628
03-0.626-1.6281.123-1.628
04-0.55-1.6280.2910.636
05-1.628-1.6281.227-1.628
06-1.628-0.1851.021-1.628
07-0.136-1.6280.874-0.626
080.975-0.55-0.55-1.628
09-0.1850.3230.465-1.628
100.701-1.6280.465-1.628