Model info
| Transcription factor | Nr2c1 | ||||||||
| Model | NR2C1_MOUSE.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 13 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | RbYvARAGGTCAn | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 19 | ||||||||
| TF family | RXR-related receptors (NR2) {2.1.3} | ||||||||
| TF subfamily | Testicular receptors (NR2C) {2.1.3.4} | ||||||||
| MGI | MGI:1352465 | ||||||||
| EntrezGene | GeneID:22025 (SSTAR profile) | ||||||||
| UniProt ID | NR2C1_MOUSE | ||||||||
| UniProt AC | Q505F1 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Nr2c1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 3.949 | 2.028 | 11.101 | 0.961 |
| 02 | 0.961 | 5.978 | 8.006 | 3.096 |
| 03 | 1.921 | 10.034 | 0.961 | 5.124 |
| 04 | 4.803 | 8.112 | 4.056 | 1.067 |
| 05 | 12.169 | 0.0 | 5.871 | 0.0 |
| 06 | 4.163 | 2.882 | 9.927 | 1.067 |
| 07 | 17.079 | 0.0 | 0.961 | 0.0 |
| 08 | 0.0 | 0.0 | 18.039 | 0.0 |
| 09 | 0.0 | 0.0 | 13.983 | 4.056 |
| 10 | 0.0 | 0.0 | 0.0 | 18.039 |
| 11 | 0.0 | 18.039 | 0.0 | 0.0 |
| 12 | 16.972 | 0.0 | 0.0 | 1.067 |
| 13 | 1.681 | 4.777 | 6.805 | 4.777 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.113 | -0.643 | 0.815 | -1.134 |
| 02 | -1.134 | 0.247 | 0.512 | -0.315 |
| 03 | -0.683 | 0.721 | -1.134 | 0.111 |
| 04 | 0.055 | 0.524 | -0.091 | -1.072 |
| 05 | 0.902 | -1.979 | 0.231 | -1.979 |
| 06 | -0.069 | -0.373 | 0.711 | -1.072 |
| 07 | 1.224 | -1.979 | -1.134 | -1.979 |
| 08 | -1.979 | -1.979 | 1.277 | -1.979 |
| 09 | -1.979 | -1.979 | 1.033 | -0.091 |
| 10 | -1.979 | -1.979 | -1.979 | 1.277 |
| 11 | -1.979 | 1.277 | -1.979 | -1.979 |
| 12 | 1.218 | -1.979 | -1.979 | -1.072 |
| 13 | -0.778 | 0.05 | 0.364 | 0.05 |