Model info
| Transcription factor | NR2C2 (GeneCards) | ||||||||
| Model | NR2C2_HUMAN.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | RbTYMSGGGKCR | ||||||||
| Best auROC (human) | 0.844 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 35 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 502 | ||||||||
| TF family | RXR-related receptors (NR2) {2.1.3} | ||||||||
| TF subfamily | Testicular receptors (NR2C) {2.1.3.4} | ||||||||
| HGNC | HGNC:7972 | ||||||||
| EntrezGene | GeneID:7182 (SSTAR profile) | ||||||||
| UniProt ID | NR2C2_HUMAN | ||||||||
| UniProt AC | P49116 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | NR2C2 expression | ||||||||
| ReMap ChIP-seq dataset list | NR2C2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 104.0 | 56.0 | 313.0 | 27.0 |
| 02 | 21.0 | 160.0 | 227.0 | 92.0 |
| 03 | 15.0 | 14.0 | 46.0 | 425.0 |
| 04 | 4.0 | 202.0 | 27.0 | 267.0 |
| 05 | 187.0 | 294.0 | 14.0 | 5.0 |
| 06 | 118.0 | 233.0 | 146.0 | 3.0 |
| 07 | 179.0 | 0.0 | 319.0 | 2.0 |
| 08 | 8.0 | 3.0 | 478.0 | 11.0 |
| 09 | 8.0 | 6.0 | 425.0 | 61.0 |
| 10 | 4.0 | 15.0 | 114.0 | 367.0 |
| 11 | 10.0 | 401.0 | 59.0 | 30.0 |
| 12 | 338.0 | 21.0 | 131.0 | 10.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.181 | -0.788 | 0.91 | -1.489 |
| 02 | -1.725 | 0.244 | 0.591 | -0.302 |
| 03 | -2.034 | -2.096 | -0.979 | 1.215 |
| 04 | -3.126 | 0.475 | -1.489 | 0.752 |
| 05 | 0.399 | 0.848 | -2.096 | -2.961 |
| 06 | -0.057 | 0.617 | 0.154 | -3.325 |
| 07 | 0.355 | -4.4 | 0.929 | -3.573 |
| 08 | -2.584 | -3.325 | 1.332 | -2.311 |
| 09 | -2.584 | -2.819 | 1.215 | -0.705 |
| 10 | -3.126 | -2.034 | -0.091 | 1.069 |
| 11 | -2.394 | 1.157 | -0.737 | -1.389 |
| 12 | 0.987 | -1.725 | 0.046 | -2.394 |