We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNR2E3
(GeneCards)
ModelNR2E3_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
C
Motif rank
0
ConsensusnAAKTCAAAARKMM
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words23
TF familyRXR-related receptors (NR2) {2.1.3}
TF subfamilyTailless-like receptors (NR2E) {2.1.3.3}
HGNCHGNC:7974
EntrezGeneGeneID:10002
(SSTAR profile)
UniProt IDNR2E3_HUMAN
UniProt ACQ9Y5X4
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.74136
0.0005 6.55021
0.0001 8.246755
GTEx tissue expression atlas NR2E3 expression
ReMap ChIP-seq dataset list NR2E3 datasets
Motifs in JASPAR
PCM
ACGT
0111.3413.54.2783.5
0218.731.5561.5560.778
0317.7630.7783.30.778
041.5561.55616.3963.111
051.5560.02.33318.73
061.55620.2850.7780.0
0721.0630.00.7780.778
0817.9523.1111.5560.0
0921.8410.00.00.778
1018.5410.03.30.778
115.6341.55613.8741.556
120.7781.5564.66715.619
133.11115.6192.3331.556
1416.5913.3061.750.972
PWM
ACGT
010.633-0.408-0.241-0.408
021.109-1.014-1.014-1.419
031.058-1.419-0.456-1.419
04-1.014-1.0140.982-0.503
05-1.014-2.111-0.7261.109
06-1.0141.186-1.419-2.111
071.222-2.111-1.419-1.419
081.069-0.503-1.014-2.111
091.257-2.111-2.111-1.419
101.1-2.111-0.456-1.419
11-0.003-1.0140.823-1.014
12-1.419-1.014-0.1670.936
13-0.5030.936-0.726-1.014
140.993-0.454-0.934-1.301