Model info
| Transcription factor | NR4A2 (GeneCards) | ||||||||
| Model | NR4A2_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 9 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | RAAGGTCAv | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 33 | ||||||||
| TF family | NGFI-B-related receptors (NR4) {2.1.4} | ||||||||
| TF subfamily | NURR1 (NR4A2) {2.1.4.0.2} | ||||||||
| HGNC | HGNC:7981 | ||||||||
| EntrezGene | GeneID:4929 (SSTAR profile) | ||||||||
| UniProt ID | NR4A2_HUMAN | ||||||||
| UniProt AC | P43354 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | NR4A2 expression | ||||||||
| ReMap ChIP-seq dataset list | NR4A2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 21.84 | 2.053 | 7.442 | 1.256 |
| 02 | 28.324 | 0.0 | 2.513 | 1.754 |
| 03 | 31.335 | 0.0 | 1.256 | 0.0 |
| 04 | 0.0 | 0.0 | 30.737 | 1.854 |
| 05 | 1.256 | 0.0 | 30.339 | 0.996 |
| 06 | 0.797 | 5.002 | 0.0 | 26.792 |
| 07 | 0.0 | 29.642 | 0.0 | 2.949 |
| 08 | 32.591 | 0.0 | 0.0 | 0.0 |
| 09 | 6.01 | 14.31 | 10.081 | 2.191 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.924 | -1.126 | -0.081 | -1.444 |
| 02 | 1.175 | -2.337 | -0.98 | -1.234 |
| 03 | 1.273 | -2.337 | -1.444 | -2.337 |
| 04 | -2.337 | -2.337 | 1.254 | -1.197 |
| 05 | -1.444 | -2.337 | 1.241 | -1.575 |
| 06 | -1.688 | -0.429 | -2.337 | 1.121 |
| 07 | -2.337 | 1.219 | -2.337 | -0.859 |
| 08 | 1.311 | -2.337 | -2.337 | -2.337 |
| 09 | -0.271 | 0.521 | 0.194 | -1.08 |