We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNRF1
(GeneCards)
ModelNRF1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusnbdSYGCGCAKGCGCvnbn
Best auROC (human)0.999
Best auROC (mouse)0.999
Peak sets in benchmark (human)31
Peak sets in benchmark (mouse)23
Aligned words512
TF familyNRF {0.0.6}
TF subfamilyNRF-1 (alpha-pal) {0.0.6.0.1}
HGNCHGNC:7996
EntrezGeneGeneID:4899
(SSTAR profile)
UniProt IDNRF1_HUMAN
UniProt ACQ16656
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -1.9155900000000001
0.0005 0.43336
0.0001 5.50416
GTEx tissue expression atlas NRF1 expression
ReMap ChIP-seq dataset list NRF1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0112.039.021.08.020.078.025.040.024.071.017.026.05.079.020.014.0
0214.05.026.016.0149.016.011.091.035.09.013.026.021.011.035.021.0
0320.0109.080.010.02.028.011.00.06.045.025.09.05.080.054.015.0
041.05.05.022.08.09.014.0231.013.018.014.0125.02.06.03.023.0
051.00.023.00.05.00.033.00.04.01.031.00.026.00.0375.00.0
061.035.00.00.00.01.00.00.015.0441.05.01.00.00.00.00.0
070.00.016.00.01.01.0475.00.00.00.05.00.00.00.01.00.0
080.01.00.00.00.01.00.00.00.0494.02.01.00.00.00.00.0
090.00.00.00.0398.054.033.011.01.01.00.00.00.01.00.00.0
1019.032.090.0258.01.01.00.054.01.00.00.032.00.01.00.010.0
110.01.020.00.01.00.033.00.07.015.068.00.00.01.0353.00.0
120.08.00.00.00.012.01.04.06.0433.01.034.00.00.00.00.0
131.00.05.00.02.07.0385.059.00.01.01.00.00.06.028.04.0
140.03.00.00.03.08.00.03.00.0339.04.076.00.055.01.07.0
150.01.02.00.0188.066.0111.040.01.02.01.01.020.014.045.07.0
1650.037.089.033.022.021.019.021.040.022.067.030.015.06.019.08.0
176.037.073.011.05.030.031.020.024.074.079.017.07.023.047.015.0
189.07.025.01.023.059.031.051.056.081.060.033.012.011.027.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.9360.221-0.39-1.326-0.4370.909-0.2180.246-0.2580.816-0.597-0.179-1.7680.922-0.437-0.786
02-0.786-1.768-0.179-0.6561.554-0.656-1.021.0630.114-1.213-0.858-0.179-0.39-1.020.114-0.39
03-0.4371.2430.934-1.112-2.582-0.106-1.02-4.398-1.5980.363-0.218-1.213-1.7680.9340.544-0.719
04-3.124-1.768-1.768-0.344-1.326-1.213-0.7861.992-0.858-0.541-0.7861.379-2.582-1.598-2.232-0.3
05-3.124-4.398-0.3-4.398-1.768-4.3980.056-4.398-1.973-3.124-0.006-4.398-0.179-4.3982.476-4.398
06-3.1240.114-4.398-4.398-4.398-3.124-4.398-4.398-0.7192.638-1.768-3.124-4.398-4.398-4.398-4.398
07-4.398-4.398-0.656-4.398-3.124-3.1242.712-4.398-4.398-4.398-1.768-4.398-4.398-4.398-3.124-4.398
08-4.398-3.124-4.398-4.398-4.398-3.124-4.398-4.398-4.3982.751-2.582-3.124-4.398-4.398-4.398-4.398
09-4.398-4.398-4.398-4.3982.5350.5440.056-1.02-3.124-3.124-4.398-4.398-4.398-3.124-4.398-4.398
10-0.4880.0251.0522.102-3.124-3.124-4.3980.544-3.124-4.398-4.3980.025-4.398-3.124-4.398-1.112
11-4.398-3.124-0.437-4.398-3.124-4.3980.056-4.398-1.452-0.7190.773-4.398-4.398-3.1242.415-4.398
12-4.398-1.326-4.398-4.398-4.398-0.936-3.124-1.973-1.5982.619-3.1240.085-4.398-4.398-4.398-4.398
13-3.124-4.398-1.768-4.398-2.582-1.4522.5020.632-4.398-3.124-3.124-4.398-4.398-1.598-0.106-1.973
14-4.398-2.232-4.398-4.398-2.232-1.326-4.398-2.232-4.3982.375-1.9730.883-4.3980.562-3.124-1.452
15-4.398-3.124-2.582-4.3981.7860.7431.2610.246-3.124-2.582-3.124-3.124-0.437-0.7860.363-1.452
160.4670.1691.0410.056-0.344-0.39-0.488-0.390.246-0.3440.758-0.038-0.719-1.598-0.488-1.326
17-1.5980.1690.843-1.02-1.768-0.038-0.006-0.437-0.2580.8570.922-0.597-1.452-0.30.406-0.719
18-1.213-1.452-0.218-3.124-0.30.632-0.0060.4870.580.9470.6480.056-0.936-1.02-0.142-0.858