We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNrf1
ModelNRF1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusnnnnbvnbGCGCAKGCGCRv
Best auROC (human)0.999
Best auROC (mouse)0.999
Peak sets in benchmark (human)31
Peak sets in benchmark (mouse)23
Aligned words407
TF familyNRF {0.0.6}
TF subfamilyNRF-1 (alpha-pal) {0.0.6.0.1}
MGIMGI:1332235
EntrezGeneGeneID:18181
(SSTAR profile)
UniProt IDNRF1_MOUSE
UniProt ACQ9WU00
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.7549399999999999
0.0005 1.43241
0.0001 6.11986
GTEx tissue expression atlas Nrf1 expression
Motifs in JASPAR
MA0506.1 (NRF1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0130.032.027.012.021.045.012.023.031.048.018.026.016.026.015.024.0
0216.025.047.010.037.048.035.031.022.017.018.015.012.031.032.010.0
0323.027.027.010.013.036.031.041.027.044.043.018.07.025.023.011.0
0412.024.021.013.018.055.014.045.025.064.019.016.03.044.018.015.0
054.029.022.03.066.047.017.057.03.039.018.012.012.051.022.04.0
0617.040.024.04.042.074.010.040.014.034.018.013.04.057.010.05.0
079.026.015.027.06.051.015.0133.07.09.08.038.03.017.016.026.0
081.00.023.01.026.03.074.00.09.02.043.00.020.01.0203.00.0
093.051.02.00.00.06.00.00.038.0300.05.00.00.01.00.00.0
100.00.041.00.015.02.0340.01.02.00.05.00.00.00.00.00.0
110.015.02.00.00.01.00.01.01.0377.03.05.00.01.00.00.0
120.00.00.01.0330.041.06.017.01.03.00.01.00.06.00.00.0
1314.044.075.0198.00.00.00.050.00.00.00.06.00.01.00.018.0
141.01.012.00.00.00.045.00.02.02.069.02.00.00.0272.00.0
150.03.00.00.00.03.00.00.03.0378.00.017.01.01.00.00.0
161.01.02.00.01.06.0368.010.00.00.00.00.00.04.013.00.0
170.02.00.00.00.08.00.03.00.0335.00.048.00.010.00.00.0
180.00.00.00.0232.036.057.030.00.00.00.00.026.04.017.04.0
1956.068.0112.022.014.09.05.012.017.026.024.07.010.013.07.04.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.1650.2290.061-0.733-0.1860.567-0.733-0.0970.1980.631-0.3370.024-0.4530.024-0.516-0.055
02-0.453-0.0150.61-0.9090.3730.6310.3180.198-0.14-0.393-0.337-0.516-0.7330.1980.229-0.909
03-0.0970.0610.061-0.909-0.6550.3450.1980.4740.0610.5440.521-0.337-1.25-0.015-0.097-0.817
04-0.733-0.055-0.186-0.655-0.3370.766-0.5830.567-0.0150.916-0.284-0.453-2.0320.544-0.337-0.516
05-1.7720.132-0.14-2.0320.9470.61-0.3930.801-2.0320.425-0.337-0.733-0.7330.691-0.14-1.772
06-0.3930.45-0.055-1.7720.4981.061-0.9090.45-0.5830.289-0.337-0.655-1.7720.801-0.909-1.567
07-1.010.024-0.5160.061-1.3960.691-0.5161.645-1.25-1.01-1.1230.399-2.032-0.393-0.4530.024
08-2.93-4.228-0.097-2.930.024-2.0321.061-4.228-1.01-2.3830.521-4.228-0.234-2.932.067-4.228
09-2.0320.691-2.383-4.228-4.228-1.396-4.228-4.2280.3992.457-1.567-4.228-4.228-2.93-4.228-4.228
10-4.228-4.2280.474-4.228-0.516-2.3832.582-2.93-2.383-4.228-1.567-4.228-4.228-4.228-4.228-4.228
11-4.228-0.516-2.383-4.228-4.228-2.93-4.228-2.93-2.932.685-2.032-1.567-4.228-2.93-4.228-4.228
12-4.228-4.228-4.228-2.932.5520.474-1.396-0.393-2.93-2.032-4.228-2.93-4.228-1.396-4.228-4.228
13-0.5830.5441.0742.042-4.228-4.228-4.2280.671-4.228-4.228-4.228-1.396-4.228-2.93-4.228-0.337
14-2.93-2.93-0.733-4.228-4.228-4.2280.567-4.228-2.383-2.3830.991-2.383-4.228-4.2282.359-4.228
15-4.228-2.032-4.228-4.228-4.228-2.032-4.228-4.228-2.0322.687-4.228-0.393-2.93-2.93-4.228-4.228
16-2.93-2.93-2.383-4.228-2.93-1.3962.661-0.909-4.228-4.228-4.228-4.228-4.228-1.772-0.655-4.228
17-4.228-2.383-4.228-4.228-4.228-1.123-4.228-2.032-4.2282.567-4.2280.631-4.228-0.909-4.228-4.228
18-4.228-4.228-4.228-4.2282.20.3450.8010.165-4.228-4.228-4.228-4.2280.024-1.772-0.393-1.772
190.7840.9771.473-0.14-0.583-1.01-1.567-0.733-0.3930.024-0.055-1.25-0.909-0.655-1.25-1.772