We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorOlig2
ModelOLIG2_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length22
Quality
A
Motif rank
0
ConsensusnMCAKMTGYYbhbndbhhbnhn
Best auROC (human)
Best auROC (mouse)0.941
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)19
Aligned words500
TF familyTal-related factors {1.2.3}
TF subfamilyNeurogenin / Atonal-like factors {1.2.3.4}
MGIMGI:1355331
EntrezGeneGeneID:50913
(SSTAR profile)
UniProt IDOLIG2_MOUSE
UniProt ACQ9EQW6
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.38066
0.0005 12.24681
0.0001 16.01086
GTEx tissue expression atlas Olig2 expression
Motifs in JASPAR
MA0678.1 (OLIG2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0143.082.023.00.029.078.08.01.027.081.032.00.017.064.013.01.0
0214.099.03.00.039.0263.01.02.02.073.01.00.01.01.00.00.0
0347.00.02.07.0380.06.012.038.03.02.00.00.01.01.00.00.0
0411.012.0192.0216.00.00.02.07.00.00.04.010.02.01.018.024.0
054.05.04.00.05.07.01.00.037.0170.02.07.048.0189.018.02.0
061.02.00.091.02.06.00.0363.00.00.00.025.00.00.00.09.0
071.00.02.00.00.00.07.01.00.00.00.00.00.00.0440.048.0
080.00.00.01.00.00.00.00.06.0164.077.0202.01.06.014.028.0
090.01.02.04.01.037.05.0127.08.020.08.055.09.042.024.0156.0
103.06.06.03.014.026.08.052.08.019.03.09.018.0117.049.0158.0
115.020.08.010.031.064.08.065.02.034.02.028.018.097.034.073.0
129.016.021.010.027.0112.010.066.05.033.03.011.05.089.028.054.0
139.021.015.01.073.0100.013.064.012.025.014.011.017.045.041.038.0
1432.016.024.039.096.022.07.066.010.014.015.044.015.016.031.052.0
1516.025.059.053.010.022.09.027.02.019.026.030.019.054.054.074.0
168.021.05.013.035.048.04.033.020.081.022.025.029.071.030.054.0
1716.030.06.040.045.055.09.0112.06.021.02.032.09.030.028.058.0
188.015.021.032.033.022.018.063.04.017.011.013.022.048.087.085.0
1923.019.017.08.029.037.08.028.010.041.043.043.020.042.068.063.0
2021.021.016.024.026.031.07.075.028.028.018.062.021.041.019.061.0
2136.020.031.09.034.040.06.041.015.08.024.013.018.063.068.073.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.3180.959-0.3-4.398-0.0720.909-1.326-3.124-0.1420.9470.025-4.398-0.5970.713-0.858-3.124
02-0.7861.147-2.232-4.3980.2212.121-3.124-2.582-2.5820.843-3.124-4.398-3.124-3.124-4.398-4.398
030.406-4.398-2.582-1.4522.489-1.598-0.9360.195-2.232-2.582-4.398-4.398-3.124-3.124-4.398-4.398
04-1.02-0.9361.8071.925-4.398-4.398-2.582-1.452-4.398-4.398-1.973-1.112-2.582-3.124-0.541-0.258
05-1.973-1.768-1.973-4.398-1.768-1.452-3.124-4.3980.1691.686-2.582-1.4520.4271.791-0.541-2.582
06-3.124-2.582-4.3981.063-2.582-1.598-4.3982.443-4.398-4.398-4.398-0.218-4.398-4.398-4.398-1.213
07-3.124-4.398-2.582-4.398-4.398-4.398-1.452-3.124-4.398-4.398-4.398-4.398-4.398-4.3982.6350.427
08-4.398-4.398-4.398-3.124-4.398-4.398-4.398-4.398-1.5981.650.8961.858-3.124-1.598-0.786-0.106
09-4.398-3.124-2.582-1.973-3.1240.169-1.7681.395-1.326-0.437-1.3260.562-1.2130.294-0.2581.6
10-2.232-1.598-1.598-2.232-0.786-0.179-1.3260.506-1.326-0.488-2.232-1.213-0.5411.3130.4471.613
11-1.768-0.437-1.326-1.112-0.0060.713-1.3260.728-2.5820.085-2.582-0.106-0.5411.1260.0850.843
12-1.213-0.656-0.39-1.112-0.1421.27-1.1120.743-1.7680.056-2.232-1.02-1.7681.041-0.1060.544
13-1.213-0.39-0.719-3.1240.8431.157-0.8580.713-0.936-0.218-0.786-1.02-0.5970.3630.2710.195
140.025-0.656-0.2580.2211.116-0.344-1.4520.743-1.112-0.786-0.7190.341-0.719-0.656-0.0060.506
15-0.656-0.2180.6320.525-1.112-0.344-1.213-0.142-2.582-0.488-0.179-0.038-0.4880.5440.5440.857
16-1.326-0.39-1.768-0.8580.1140.427-1.9730.056-0.4370.947-0.344-0.218-0.0720.816-0.0380.544
17-0.656-0.038-1.5980.2460.3630.562-1.2131.27-1.598-0.39-2.5820.025-1.213-0.038-0.1060.615
18-1.326-0.719-0.390.0250.056-0.344-0.5410.697-1.973-0.597-1.02-0.858-0.3440.4271.0180.995
19-0.3-0.488-0.597-1.326-0.0720.169-1.326-0.106-1.1120.2710.3180.318-0.4370.2940.7730.697
20-0.39-0.39-0.656-0.258-0.179-0.006-1.4520.87-0.106-0.106-0.5410.681-0.390.271-0.4880.665
210.142-0.437-0.006-1.2130.0850.246-1.5980.271-0.719-1.326-0.258-0.858-0.5410.6970.7730.843