We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorONECUT3
(GeneCards)
ModelONEC3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensusdWWbGATTTTTb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words10343
TF familyHD-CUT factors {3.1.9}
TF subfamilyONECUT {3.1.9.1}
HGNCHGNC:13399
EntrezGeneGeneID:390874
(SSTAR profile)
UniProt IDONEC3_HUMAN
UniProt ACO60422
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.89307
0.0005 5.5785350000000005
0.0001 8.598254999999998
GTEx tissue expression atlas ONECUT3 expression
ReMap ChIP-seq dataset list ONECUT3 datasets
Motifs in JASPAR
PCM
ACGT
011870.01779.01782.04911.0
027191.51048.51050.51051.5
031050.251047.251049.257195.25
041049.03359.01050.04884.0
052.00.010340.00.0
0610341.00.01.00.0
070.01.00.010341.0
084.06.00.010332.0
09867.019.027.09429.0
10494.0151.081.09616.0
11624.01174.0219.08325.0
12987.01936.01399.06020.0
PWM
ACGT
01-0.324-0.373-0.3720.641
021.022-0.901-0.899-0.898
03-0.9-0.902-0.9011.023
04-0.9010.262-0.90.636
05-6.397-7.0211.385-7.021
061.386-7.021-6.661-7.021
07-7.021-6.661-7.0211.386
08-6.016-5.741-7.0211.385
09-1.091-4.799-4.4811.293
10-1.651-2.826-3.4361.313
11-1.419-0.788-2.4591.169
12-0.962-0.289-0.6130.845