Model info
| Transcription factor | ONECUT3 (GeneCards) | ||||||||
| Model | ONEC3_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dWWbGATTTTTb | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 10343 | ||||||||
| TF family | HD-CUT factors {3.1.9} | ||||||||
| TF subfamily | ONECUT {3.1.9.1} | ||||||||
| HGNC | HGNC:13399 | ||||||||
| EntrezGene | GeneID:390874 (SSTAR profile) | ||||||||
| UniProt ID | ONEC3_HUMAN | ||||||||
| UniProt AC | O60422 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ONECUT3 expression | ||||||||
| ReMap ChIP-seq dataset list | ONECUT3 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1870.0 | 1779.0 | 1782.0 | 4911.0 |
| 02 | 7191.5 | 1048.5 | 1050.5 | 1051.5 |
| 03 | 1050.25 | 1047.25 | 1049.25 | 7195.25 |
| 04 | 1049.0 | 3359.0 | 1050.0 | 4884.0 |
| 05 | 2.0 | 0.0 | 10340.0 | 0.0 |
| 06 | 10341.0 | 0.0 | 1.0 | 0.0 |
| 07 | 0.0 | 1.0 | 0.0 | 10341.0 |
| 08 | 4.0 | 6.0 | 0.0 | 10332.0 |
| 09 | 867.0 | 19.0 | 27.0 | 9429.0 |
| 10 | 494.0 | 151.0 | 81.0 | 9616.0 |
| 11 | 624.0 | 1174.0 | 219.0 | 8325.0 |
| 12 | 987.0 | 1936.0 | 1399.0 | 6020.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.324 | -0.373 | -0.372 | 0.641 |
| 02 | 1.022 | -0.901 | -0.899 | -0.898 |
| 03 | -0.9 | -0.902 | -0.901 | 1.023 |
| 04 | -0.901 | 0.262 | -0.9 | 0.636 |
| 05 | -6.397 | -7.021 | 1.385 | -7.021 |
| 06 | 1.386 | -7.021 | -6.661 | -7.021 |
| 07 | -7.021 | -6.661 | -7.021 | 1.386 |
| 08 | -6.016 | -5.741 | -7.021 | 1.385 |
| 09 | -1.091 | -4.799 | -4.481 | 1.293 |
| 10 | -1.651 | -2.826 | -3.436 | 1.313 |
| 11 | -1.419 | -0.788 | -2.459 | 1.169 |
| 12 | -0.962 | -0.289 | -0.613 | 0.845 |