We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorOSR2
(GeneCards)
ModelOSR2_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensusnbdGCTnCTGn
Best auROC (human)0.886
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words526
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:15830
EntrezGeneGeneID:116039
(SSTAR profile)
UniProt IDOSR2_HUMAN
UniProt ACQ8N2R0
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.55789
0.0005 11.49876
0.0001 15.744265000000002
GTEx tissue expression atlas OSR2 expression
ReMap ChIP-seq dataset list OSR2 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0116.042.020.027.09.082.014.028.019.092.019.034.014.033.015.029.0
0217.01.020.020.071.06.046.0126.018.07.025.018.015.00.061.042.0
038.011.0101.01.00.04.010.00.016.017.0119.00.06.036.0162.02.0
040.030.00.00.01.066.00.01.00.0376.03.013.00.03.00.00.0
050.00.00.01.02.023.00.0450.00.00.00.03.00.00.00.014.0
060.00.01.01.07.06.00.010.00.00.00.00.0137.0135.083.0113.0
071.0143.00.00.00.0141.00.00.00.084.00.00.00.0123.00.01.0
080.00.00.01.01.05.00.0485.00.00.00.00.00.00.00.01.0
090.00.01.00.00.00.05.00.00.00.00.00.01.05.0462.019.0
100.00.01.00.01.00.02.02.077.0137.0117.0137.07.05.02.05.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.6440.306-0.425-0.13-1.2010.971-0.774-0.094-0.4761.086-0.4760.097-0.7740.068-0.707-0.06
02-0.585-3.113-0.425-0.4250.828-1.5860.3971.399-0.529-1.441-0.206-0.529-0.707-4.3880.6770.306
03-1.314-1.0081.179-3.113-4.388-1.962-1.1-4.388-0.644-0.5851.342-4.388-1.5860.1541.65-2.57
04-4.388-0.026-4.388-4.388-3.1130.755-4.388-3.113-4.3882.49-2.22-0.846-4.388-2.22-4.388-4.388
05-4.388-4.388-4.388-3.113-2.57-0.288-4.3882.67-4.388-4.388-4.388-2.22-4.388-4.388-4.388-0.774
06-4.388-4.388-3.113-3.113-1.441-1.586-4.388-1.1-4.388-4.388-4.388-4.3881.4821.4680.9831.29
07-3.1131.525-4.388-4.388-4.3881.511-4.388-4.388-4.3880.995-4.388-4.388-4.3881.375-4.388-3.113
08-4.388-4.388-4.388-3.113-3.113-1.756-4.3882.745-4.388-4.388-4.388-4.388-4.388-4.388-4.388-3.113
09-4.388-4.388-3.113-4.388-4.388-4.388-1.756-4.388-4.388-4.388-4.388-4.388-3.113-1.7562.696-0.476
10-4.388-4.388-3.113-4.388-3.113-4.388-2.57-2.570.9081.4821.3251.482-1.441-1.756-2.57-1.756