Model info
| Transcription factor | OSR2 (GeneCards) | ||||||||
| Model | OSR2_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 16 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | nbhbYWGCTnCTShdb | ||||||||
| Best auROC (human) | 0.898 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 492 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:15830 | ||||||||
| EntrezGene | GeneID:116039 (SSTAR profile) | ||||||||
| UniProt ID | OSR2_HUMAN | ||||||||
| UniProt AC | Q8N2R0 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | OSR2 expression | ||||||||
| ReMap ChIP-seq dataset list | OSR2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 82.0 | 78.0 | 231.0 | 82.0 |
| 02 | 34.0 | 191.0 | 100.0 | 148.0 |
| 03 | 79.0 | 136.0 | 58.0 | 200.0 |
| 04 | 62.0 | 164.0 | 179.0 | 68.0 |
| 05 | 26.0 | 317.0 | 28.0 | 102.0 |
| 06 | 163.0 | 10.0 | 69.0 | 231.0 |
| 07 | 16.0 | 8.0 | 447.0 | 2.0 |
| 08 | 7.0 | 460.0 | 4.0 | 2.0 |
| 09 | 1.0 | 23.0 | 1.0 | 448.0 |
| 10 | 115.0 | 102.0 | 97.0 | 159.0 |
| 11 | 1.0 | 469.0 | 1.0 | 2.0 |
| 12 | 4.0 | 82.0 | 1.0 | 386.0 |
| 13 | 45.0 | 79.0 | 292.0 | 57.0 |
| 14 | 86.0 | 211.0 | 58.0 | 118.0 |
| 15 | 143.0 | 52.0 | 110.0 | 168.0 |
| 16 | 38.0 | 80.0 | 278.0 | 77.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.36 | -0.409 | 0.663 | -0.36 |
| 02 | -1.215 | 0.475 | -0.165 | 0.222 |
| 03 | -0.397 | 0.138 | -0.699 | 0.52 |
| 04 | -0.634 | 0.323 | 0.41 | -0.544 |
| 05 | -1.47 | 0.978 | -1.4 | -0.146 |
| 06 | 0.317 | -2.34 | -0.53 | 0.663 |
| 07 | -1.921 | -2.53 | 1.32 | -3.522 |
| 08 | -2.641 | 1.349 | -3.074 | -3.522 |
| 09 | -3.854 | -1.585 | -3.854 | 1.322 |
| 10 | -0.028 | -0.146 | -0.195 | 0.293 |
| 11 | -3.854 | 1.368 | -3.854 | -3.522 |
| 12 | -3.074 | -0.36 | -3.854 | 1.174 |
| 13 | -0.945 | -0.397 | 0.896 | -0.716 |
| 14 | -0.314 | 0.573 | -0.699 | -0.002 |
| 15 | 0.188 | -0.805 | -0.071 | 0.347 |
| 16 | -1.108 | -0.385 | 0.847 | -0.422 |