We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorOSR2
(GeneCards)
ModelOSR2_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusnbhbYWGCTnCTShdb
Best auROC (human)0.898
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words492
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:15830
EntrezGeneGeneID:116039
(SSTAR profile)
UniProt IDOSR2_HUMAN
UniProt ACQ8N2R0
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.473459999999999
0.0005 5.46941
0.0001 7.42281
GTEx tissue expression atlas OSR2 expression
ReMap ChIP-seq dataset list OSR2 datasets
Motifs in JASPAR
PCM
ACGT
0182.078.0231.082.0
0234.0191.0100.0148.0
0379.0136.058.0200.0
0462.0164.0179.068.0
0526.0317.028.0102.0
06163.010.069.0231.0
0716.08.0447.02.0
087.0460.04.02.0
091.023.01.0448.0
10115.0102.097.0159.0
111.0469.01.02.0
124.082.01.0386.0
1345.079.0292.057.0
1486.0211.058.0118.0
15143.052.0110.0168.0
1638.080.0278.077.0
PWM
ACGT
01-0.36-0.4090.663-0.36
02-1.2150.475-0.1650.222
03-0.3970.138-0.6990.52
04-0.6340.3230.41-0.544
05-1.470.978-1.4-0.146
060.317-2.34-0.530.663
07-1.921-2.531.32-3.522
08-2.6411.349-3.074-3.522
09-3.854-1.585-3.8541.322
10-0.028-0.146-0.1950.293
11-3.8541.368-3.854-3.522
12-3.074-0.36-3.8541.174
13-0.945-0.3970.896-0.716
14-0.3140.573-0.699-0.002
150.188-0.805-0.0710.347
16-1.108-0.3850.847-0.422