Transcription factor | OSR2 (GeneCards) | ||||||||
Model | OSR2_HUMAN.H11MO.0.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 16 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | nbhbYWGCTnCTShdb | ||||||||
Best auROC (human) | 0.898 | ||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | 3 | ||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 492 | ||||||||
TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
TF subfamily | unclassified {2.3.3.0} | ||||||||
HGNC | HGNC:15830 | ||||||||
EntrezGene | GeneID:116039 (SSTAR profile) | ||||||||
UniProt ID | OSR2_HUMAN | ||||||||
UniProt AC | Q8N2R0 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | OSR2 expression | ||||||||
ReMap ChIP-seq dataset list | OSR2 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 82.0 | 78.0 | 231.0 | 82.0 |
02 | 34.0 | 191.0 | 100.0 | 148.0 |
03 | 79.0 | 136.0 | 58.0 | 200.0 |
04 | 62.0 | 164.0 | 179.0 | 68.0 |
05 | 26.0 | 317.0 | 28.0 | 102.0 |
06 | 163.0 | 10.0 | 69.0 | 231.0 |
07 | 16.0 | 8.0 | 447.0 | 2.0 |
08 | 7.0 | 460.0 | 4.0 | 2.0 |
09 | 1.0 | 23.0 | 1.0 | 448.0 |
10 | 115.0 | 102.0 | 97.0 | 159.0 |
11 | 1.0 | 469.0 | 1.0 | 2.0 |
12 | 4.0 | 82.0 | 1.0 | 386.0 |
13 | 45.0 | 79.0 | 292.0 | 57.0 |
14 | 86.0 | 211.0 | 58.0 | 118.0 |
15 | 143.0 | 52.0 | 110.0 | 168.0 |
16 | 38.0 | 80.0 | 278.0 | 77.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.36 | -0.409 | 0.663 | -0.36 |
02 | -1.215 | 0.475 | -0.165 | 0.222 |
03 | -0.397 | 0.138 | -0.699 | 0.52 |
04 | -0.634 | 0.323 | 0.41 | -0.544 |
05 | -1.47 | 0.978 | -1.4 | -0.146 |
06 | 0.317 | -2.34 | -0.53 | 0.663 |
07 | -1.921 | -2.53 | 1.32 | -3.522 |
08 | -2.641 | 1.349 | -3.074 | -3.522 |
09 | -3.854 | -1.585 | -3.854 | 1.322 |
10 | -0.028 | -0.146 | -0.195 | 0.293 |
11 | -3.854 | 1.368 | -3.854 | -3.522 |
12 | -3.074 | -0.36 | -3.854 | 1.174 |
13 | -0.945 | -0.397 | 0.896 | -0.716 |
14 | -0.314 | 0.573 | -0.699 | -0.002 |
15 | 0.188 | -0.805 | -0.071 | 0.347 |
16 | -1.108 | -0.385 | 0.847 | -0.422 |