Transcription factor | OVOL1 (GeneCards) | ||||||||
Model | OVOL1_HUMAN.H11MO.0.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 9 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | KGTAACKGT | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 7 | ||||||||
TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
TF subfamily | OVOL-factors {2.3.3.17} | ||||||||
HGNC | HGNC:8525 | ||||||||
EntrezGene | GeneID:5017 (SSTAR profile) | ||||||||
UniProt ID | OVOL1_HUMAN | ||||||||
UniProt AC | O14753 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | OVOL1 expression | ||||||||
ReMap ChIP-seq dataset list | OVOL1 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 0.0 | 1.0 | 2.0 | 4.0 |
02 | 1.0 | 0.0 | 6.0 | 0.0 |
03 | 0.0 | 0.0 | 1.0 | 6.0 |
04 | 7.0 | 0.0 | 0.0 | 0.0 |
05 | 6.0 | 1.0 | 0.0 | 0.0 |
06 | 1.0 | 6.0 | 0.0 | 0.0 |
07 | 1.0 | 0.0 | 2.0 | 4.0 |
08 | 1.0 | 0.0 | 6.0 | 0.0 |
09 | 2.0 | 0.0 | 0.0 | 5.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -1.525 | -0.408 | 0.106 | 0.696 |
02 | -0.408 | -1.525 | 1.065 | -1.525 |
03 | -1.525 | -1.525 | -0.408 | 1.065 |
04 | 1.208 | -1.525 | -1.525 | -1.525 |
05 | 1.065 | -0.408 | -1.525 | -1.525 |
06 | -0.408 | 1.065 | -1.525 | -1.525 |
07 | -0.408 | -1.525 | 0.106 | 0.696 |
08 | -0.408 | -1.525 | 1.065 | -1.525 |
09 | 0.106 | -1.525 | -1.525 | 0.897 |