Transcription factor | TP53 (GeneCards) | ||||||||
Model | P53_HUMAN.H11MO.1.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 13 | ||||||||
Quality | A | ||||||||
Motif rank | 1 | ||||||||
Consensus | dRRCATGYCYRKR | ||||||||
Best auROC (human) | 0.988 | ||||||||
Best auROC (mouse) | 0.981 | ||||||||
Peak sets in benchmark (human) | 141 | ||||||||
Peak sets in benchmark (mouse) | 39 | ||||||||
Aligned words | 500 | ||||||||
TF family | p53-related factors {6.3.1} | ||||||||
TF subfamily | p53 {6.3.1.0.1} | ||||||||
HGNC | HGNC:11998 | ||||||||
EntrezGene | GeneID:7157 (SSTAR profile) | ||||||||
UniProt ID | P53_HUMAN | ||||||||
UniProt AC | P04637 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | TP53 expression | ||||||||
ReMap ChIP-seq dataset list | TP53 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 111.0 | 43.0 | 280.0 | 66.0 |
02 | 111.0 | 29.0 | 315.0 | 45.0 |
03 | 268.0 | 3.0 | 204.0 | 25.0 |
04 | 1.0 | 490.0 | 5.0 | 4.0 |
05 | 423.0 | 0.0 | 3.0 | 74.0 |
06 | 85.0 | 1.0 | 18.0 | 396.0 |
07 | 0.0 | 4.0 | 496.0 | 0.0 |
08 | 11.0 | 302.0 | 2.0 | 185.0 |
09 | 11.0 | 444.0 | 11.0 | 34.0 |
10 | 54.0 | 155.0 | 12.0 | 279.0 |
11 | 104.0 | 25.0 | 334.0 | 37.0 |
12 | 45.0 | 9.0 | 384.0 | 62.0 |
13 | 140.0 | 10.0 | 337.0 | 13.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.117 | -1.044 | 0.8 | -0.628 |
02 | -0.117 | -1.421 | 0.917 | -1.0 |
03 | 0.756 | -3.325 | 0.485 | -1.561 |
04 | -3.903 | 1.357 | -2.961 | -3.126 |
05 | 1.21 | -4.4 | -3.325 | -0.516 |
06 | -0.38 | -3.903 | -1.868 | 1.145 |
07 | -4.4 | -3.126 | 1.369 | -4.4 |
08 | -2.311 | 0.875 | -3.573 | 0.388 |
09 | -2.311 | 1.259 | -2.311 | -1.27 |
10 | -0.823 | 0.213 | -2.234 | 0.796 |
11 | -0.181 | -1.561 | 0.975 | -1.189 |
12 | -1.0 | -2.484 | 1.114 | -0.689 |
13 | 0.112 | -2.394 | 0.984 | -2.163 |