We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTp53
ModelP53_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length23
Quality
A
Motif rank
0
ConsensusvnRRACAWGYMYdGRCWdGhYhn
Best auROC (human)0.999
Best auROC (mouse)0.994
Peak sets in benchmark (human)141
Peak sets in benchmark (mouse)39
Aligned words514
TF familyp53-related factors {6.3.1}
TF subfamilyp53 {6.3.1.0.1}
MGIMGI:98834
EntrezGeneGeneID:22059
(SSTAR profile)
UniProt IDP53_MOUSE
UniProt ACP02340
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.88731
0.0005 6.24421
0.0001 11.30986
GTEx tissue expression atlas Tp53 expression
Motifs in JASPAR
MA0106.1 (TP53; Homo sapiens)
MA0106.2 (TP53; Homo sapiens)
MA0106.3 (TP53; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0132.040.033.012.0125.030.011.047.019.018.022.032.020.018.022.012.0
0234.02.0156.04.064.018.014.010.031.03.051.03.024.09.067.03.0
0334.05.098.016.012.01.06.013.064.010.0201.013.04.06.07.03.0
0498.03.011.02.018.01.02.01.0215.01.096.00.029.01.011.04.0
055.0346.02.07.01.04.01.00.00.0118.01.01.00.07.00.00.0
064.01.01.00.0432.00.018.025.02.01.01.00.05.01.02.00.0
0796.02.013.0332.00.00.00.03.07.00.05.010.010.00.00.015.0
081.00.0112.00.01.00.01.00.02.02.013.01.01.04.0354.01.0
091.03.00.01.00.02.00.04.015.0298.02.0165.00.00.00.02.0
104.08.01.03.016.0273.02.012.00.00.01.01.025.0112.014.021.0
1110.022.09.04.019.0275.03.096.04.011.01.02.04.020.05.08.0
1212.01.021.03.0148.030.0121.029.010.00.07.01.017.016.062.015.0
1314.01.0166.06.028.00.09.010.012.01.0197.01.06.00.042.00.0
1432.01.025.02.01.00.01.00.093.06.0306.09.09.01.05.02.0
150.0127.07.01.01.07.00.00.012.0313.07.05.00.05.06.02.0
162.08.01.02.0375.019.09.049.04.012.01.03.00.02.03.03.0
17104.011.0105.0161.010.05.04.022.06.02.03.03.018.00.012.027.0
1812.07.0115.04.010.05.02.01.013.06.099.06.05.07.0191.010.0
198.011.014.07.09.04.00.012.056.0243.019.089.03.01.015.02.0
2013.031.019.013.037.0194.05.023.07.021.06.014.011.057.022.020.0
2114.026.017.011.047.0193.06.057.09.018.07.018.09.029.013.019.0
2215.019.036.09.0137.042.049.038.07.013.09.014.021.038.035.011.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.0370.2580.068-0.9241.391-0.026-1.0080.418-0.476-0.529-0.3320.037-0.425-0.529-0.332-0.924
020.097-2.571.612-1.9620.725-0.529-0.774-1.10.006-2.220.499-2.22-0.246-1.2010.77-2.22
030.097-1.7561.148-0.644-0.924-3.113-1.586-0.8460.725-1.11.865-0.846-1.962-1.586-1.441-2.22
041.148-2.22-1.008-2.57-0.529-3.113-2.57-3.1131.932-3.1131.128-4.388-0.06-3.113-1.008-1.962
05-1.7562.407-2.57-1.441-3.113-1.962-3.113-4.388-4.3881.334-3.113-3.113-4.388-1.441-4.388-4.388
06-1.962-3.113-3.113-4.3882.629-4.388-0.529-0.206-2.57-3.113-3.113-4.388-1.756-3.113-2.57-4.388
071.128-2.57-0.8462.366-4.388-4.388-4.388-2.22-1.441-4.388-1.756-1.1-1.1-4.388-4.388-0.707
08-3.113-4.3881.282-4.388-3.113-4.388-3.113-4.388-2.57-2.57-0.846-3.113-3.113-1.9622.43-3.113
09-3.113-2.22-4.388-3.113-4.388-2.57-4.388-1.962-0.7072.258-2.571.668-4.388-4.388-4.388-2.57
10-1.962-1.314-3.113-2.22-0.6442.17-2.57-0.924-4.388-4.388-3.113-3.113-0.2061.282-0.774-0.378
11-1.1-0.332-1.201-1.962-0.4762.178-2.221.128-1.962-1.008-3.113-2.57-1.962-0.425-1.756-1.314
12-0.924-3.113-0.378-2.221.559-0.0261.359-0.06-1.1-4.388-1.441-3.113-0.585-0.6440.693-0.707
13-0.774-3.1131.674-1.586-0.094-4.388-1.201-1.1-0.924-3.1131.845-3.113-1.586-4.3880.306-4.388
140.037-3.113-0.206-2.57-3.113-4.388-3.113-4.3881.096-1.5862.284-1.201-1.201-3.113-1.756-2.57
15-4.3881.407-1.441-3.113-3.113-1.441-4.388-4.388-0.9242.307-1.441-1.756-4.388-1.756-1.586-2.57
16-2.57-1.314-3.113-2.572.488-0.476-1.2010.459-1.962-0.924-3.113-2.22-4.388-2.57-2.22-2.22
171.208-1.0081.2171.643-1.1-1.756-1.962-0.332-1.586-2.57-2.22-2.22-0.529-4.388-0.924-0.13
18-0.924-1.4411.308-1.962-1.1-1.756-2.57-3.113-0.846-1.5861.159-1.586-1.756-1.4411.814-1.1
19-1.314-1.008-0.774-1.441-1.201-1.962-4.388-0.9240.5922.054-0.4761.053-2.22-3.113-0.707-2.57
20-0.8460.006-0.476-0.8460.1811.829-1.756-0.288-1.441-0.378-1.586-0.774-1.0080.609-0.332-0.425
21-0.774-0.168-0.585-1.0080.4181.824-1.5860.609-1.201-0.529-1.441-0.529-1.201-0.06-0.846-0.476
22-0.707-0.4760.154-1.2011.4820.3060.4590.207-1.441-0.846-1.201-0.774-0.3780.2070.126-1.008