Check the newest release v12
Model info
Transcription factorTp53
ModelP53_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
1
ConsensusdRRCAWGYCYRGR
Best auROC (human)0.987
Best auROC (mouse)0.981
Peak sets in benchmark (human)141
Peak sets in benchmark (mouse)39
Aligned words504
TF familyp53-related factors {6.3.1}
TF subfamilyp53 {6.3.1.0.1}
MGIMGI:98834
EntrezGeneGeneID:22059
(SSTAR profile)
UniProt IDP53_MOUSE
UniProt ACP02340
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.9860100000000003
0.0005 5.085715
0.0001 7.299875
GTEx tissue expression atlas Tp53 expression
Motifs in JASPAR
MA0106.1 (TP53; Homo sapiens)
MA0106.2 (TP53; Homo sapiens)
MA0106.3 (TP53; Homo sapiens)
PCM
ACGT
01163.023.0254.060.0
02112.013.0343.032.0
03278.01.0203.018.0
040.0495.03.02.0
05441.01.06.052.0
06124.00.017.0359.0
070.00.0500.00.0
0812.0307.02.0179.0
0914.0418.014.054.0
1056.0249.021.0174.0
11181.012.0263.044.0
1241.011.0415.033.0
13129.09.0347.015.0
PWM
ACGT
010.263-1.640.703-0.721
02-0.108-2.1631.002-1.328
030.793-3.9030.48-1.868
04-4.41.367-3.325-3.573
051.252-3.903-2.819-0.86
06-0.008-4.4-1.921.047
07-4.4-4.41.377-4.4
08-2.2340.891-3.5730.355
09-2.0961.199-2.096-0.823
10-0.7880.683-1.7250.327
110.366-2.2340.737-1.022
12-1.09-2.3111.191-1.298
130.031-2.4841.013-2.034