We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPOU5F1B
(GeneCards)
ModelP5F1B_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length16
Quality
D
Motif rank
0
ConsensusdvWTTTGCATAWKYWd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words664
TF familyPOU domain factors {3.1.10}
TF subfamilyPOU5 (Oct-3/4-like factors) {3.1.10.5}
HGNCHGNC:9223
EntrezGeneGeneID:5462
(SSTAR profile)
UniProt IDP5F1B_HUMAN
UniProt ACQ06416
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.2374600000000004
0.0005 5.38616
0.0001 7.779260000000001
GTEx tissue expression atlas POU5F1B expression
ReMap ChIP-seq dataset list POU5F1B datasets
Motifs in JASPAR
PCM
ACGT
01167.75103.75131.75260.75
02290.75162.75118.7591.75
03527.034.020.083.0
0421.049.016.0578.0
05105.59.55.5543.5
06102.252.253.25556.25
0744.752.75612.753.75
0875.25586.252.250.25
09658.01.03.02.0
1015.05.01.0643.0
11626.755.7523.757.75
1294.557.511.5500.5
1389.532.5171.5370.5
1464.75375.7525.75197.75
15440.035.044.0145.0
16196.559.568.5339.5
PWM
ACGT
010.01-0.464-0.2290.448
020.556-0.02-0.331-0.585
031.149-1.549-2.048-0.684
04-2.003-1.197-2.2521.241
05-0.448-2.713-3.1581.179
06-0.479-3.767-3.5381.202
07-1.285-3.6461.299-3.44
08-0.781.255-3.767-4.493
091.37-4.157-3.59-3.834
10-2.311-3.231-4.1571.347
111.321-3.124-1.888-2.884
12-0.556-1.042-2.5471.097
13-0.609-1.5920.0320.798
14-0.9260.812-1.8120.173
150.969-1.521-1.301-0.134
160.167-1.009-0.8710.711