Transcription factor | TP73 (GeneCards) | ||||||||
Model | P73_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 21 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | nddRCWWGYbSWRRCWWGYhb | ||||||||
Best auROC (human) | 0.998 | ||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | 10 | ||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 504 | ||||||||
TF family | p53-related factors {6.3.1} | ||||||||
TF subfamily | p73 {6.3.1.0.3} | ||||||||
HGNC | HGNC:12003 | ||||||||
EntrezGene | GeneID:7161 (SSTAR profile) | ||||||||
UniProt ID | P73_HUMAN | ||||||||
UniProt AC | O15350 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | TP73 expression | ||||||||
ReMap ChIP-seq dataset list | TP73 datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 64.0 | 10.0 | 60.0 | 23.0 | 80.0 | 17.0 | 12.0 | 43.0 | 27.0 | 13.0 | 21.0 | 28.0 | 21.0 | 13.0 | 51.0 | 16.0 |
02 | 52.0 | 7.0 | 112.0 | 21.0 | 20.0 | 6.0 | 5.0 | 22.0 | 42.0 | 9.0 | 71.0 | 22.0 | 13.0 | 6.0 | 64.0 | 27.0 |
03 | 84.0 | 4.0 | 26.0 | 13.0 | 15.0 | 4.0 | 1.0 | 8.0 | 79.0 | 6.0 | 149.0 | 18.0 | 20.0 | 4.0 | 48.0 | 20.0 |
04 | 3.0 | 189.0 | 2.0 | 4.0 | 2.0 | 13.0 | 0.0 | 3.0 | 1.0 | 221.0 | 0.0 | 2.0 | 0.0 | 51.0 | 5.0 | 3.0 |
05 | 3.0 | 1.0 | 1.0 | 1.0 | 338.0 | 54.0 | 29.0 | 53.0 | 1.0 | 0.0 | 1.0 | 5.0 | 0.0 | 4.0 | 5.0 | 3.0 |
06 | 144.0 | 3.0 | 45.0 | 150.0 | 9.0 | 1.0 | 1.0 | 48.0 | 4.0 | 0.0 | 0.0 | 32.0 | 19.0 | 0.0 | 1.0 | 42.0 |
07 | 1.0 | 0.0 | 174.0 | 1.0 | 0.0 | 0.0 | 4.0 | 0.0 | 2.0 | 0.0 | 45.0 | 0.0 | 0.0 | 0.0 | 272.0 | 0.0 |
08 | 0.0 | 1.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 | 47.0 | 178.0 | 2.0 | 268.0 | 0.0 | 0.0 | 0.0 | 1.0 |
09 | 10.0 | 16.0 | 12.0 | 9.0 | 28.0 | 107.0 | 5.0 | 39.0 | 0.0 | 2.0 | 0.0 | 0.0 | 23.0 | 110.0 | 54.0 | 84.0 |
10 | 4.0 | 30.0 | 26.0 | 1.0 | 19.0 | 192.0 | 5.0 | 19.0 | 4.0 | 49.0 | 10.0 | 8.0 | 6.0 | 80.0 | 40.0 | 6.0 |
11 | 17.0 | 0.0 | 0.0 | 16.0 | 185.0 | 94.0 | 2.0 | 70.0 | 45.0 | 13.0 | 0.0 | 23.0 | 26.0 | 0.0 | 0.0 | 8.0 |
12 | 46.0 | 12.0 | 194.0 | 21.0 | 79.0 | 7.0 | 8.0 | 13.0 | 1.0 | 0.0 | 1.0 | 0.0 | 24.0 | 5.0 | 77.0 | 11.0 |
13 | 89.0 | 10.0 | 31.0 | 20.0 | 21.0 | 0.0 | 2.0 | 1.0 | 144.0 | 2.0 | 118.0 | 16.0 | 11.0 | 3.0 | 28.0 | 3.0 |
14 | 2.0 | 259.0 | 3.0 | 1.0 | 0.0 | 15.0 | 0.0 | 0.0 | 2.0 | 177.0 | 0.0 | 0.0 | 0.0 | 40.0 | 0.0 | 0.0 |
15 | 1.0 | 3.0 | 0.0 | 0.0 | 255.0 | 70.0 | 16.0 | 150.0 | 2.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
16 | 36.0 | 26.0 | 29.0 | 168.0 | 2.0 | 4.0 | 0.0 | 67.0 | 0.0 | 2.0 | 2.0 | 13.0 | 14.0 | 8.0 | 6.0 | 122.0 |
17 | 7.0 | 3.0 | 42.0 | 0.0 | 6.0 | 0.0 | 33.0 | 1.0 | 4.0 | 2.0 | 31.0 | 0.0 | 3.0 | 6.0 | 358.0 | 3.0 |
18 | 7.0 | 2.0 | 2.0 | 9.0 | 1.0 | 5.0 | 0.0 | 5.0 | 50.0 | 229.0 | 7.0 | 178.0 | 0.0 | 1.0 | 0.0 | 3.0 |
19 | 23.0 | 15.0 | 11.0 | 9.0 | 48.0 | 127.0 | 6.0 | 56.0 | 1.0 | 3.0 | 1.0 | 4.0 | 22.0 | 71.0 | 31.0 | 71.0 |
20 | 26.0 | 22.0 | 32.0 | 14.0 | 31.0 | 95.0 | 5.0 | 85.0 | 5.0 | 16.0 | 14.0 | 14.0 | 14.0 | 51.0 | 38.0 | 37.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.713 | -1.112 | 0.648 | -0.3 | 0.934 | -0.597 | -0.936 | 0.318 | -0.142 | -0.858 | -0.39 | -0.106 | -0.39 | -0.858 | 0.487 | -0.656 |
02 | 0.506 | -1.452 | 1.27 | -0.39 | -0.437 | -1.598 | -1.768 | -0.344 | 0.294 | -1.213 | 0.816 | -0.344 | -0.858 | -1.598 | 0.713 | -0.142 |
03 | 0.983 | -1.973 | -0.179 | -0.858 | -0.719 | -1.973 | -3.124 | -1.326 | 0.922 | -1.598 | 1.554 | -0.541 | -0.437 | -1.973 | 0.427 | -0.437 |
04 | -2.232 | 1.791 | -2.582 | -1.973 | -2.582 | -0.858 | -4.398 | -2.232 | -3.124 | 1.948 | -4.398 | -2.582 | -4.398 | 0.487 | -1.768 | -2.232 |
05 | -2.232 | -3.124 | -3.124 | -3.124 | 2.372 | 0.544 | -0.072 | 0.525 | -3.124 | -4.398 | -3.124 | -1.768 | -4.398 | -1.973 | -1.768 | -2.232 |
06 | 1.52 | -2.232 | 0.363 | 1.561 | -1.213 | -3.124 | -3.124 | 0.427 | -1.973 | -4.398 | -4.398 | 0.025 | -0.488 | -4.398 | -3.124 | 0.294 |
07 | -3.124 | -4.398 | 1.709 | -3.124 | -4.398 | -4.398 | -1.973 | -4.398 | -2.582 | -4.398 | 0.363 | -4.398 | -4.398 | -4.398 | 2.155 | -4.398 |
08 | -4.398 | -3.124 | -4.398 | -2.582 | -4.398 | -4.398 | -4.398 | -4.398 | 0.406 | 1.732 | -2.582 | 2.14 | -4.398 | -4.398 | -4.398 | -3.124 |
09 | -1.112 | -0.656 | -0.936 | -1.213 | -0.106 | 1.224 | -1.768 | 0.221 | -4.398 | -2.582 | -4.398 | -4.398 | -0.3 | 1.252 | 0.544 | 0.983 |
10 | -1.973 | -0.038 | -0.179 | -3.124 | -0.488 | 1.807 | -1.768 | -0.488 | -1.973 | 0.447 | -1.112 | -1.326 | -1.598 | 0.934 | 0.246 | -1.598 |
11 | -0.597 | -4.398 | -4.398 | -0.656 | 1.77 | 1.095 | -2.582 | 0.802 | 0.363 | -0.858 | -4.398 | -0.3 | -0.179 | -4.398 | -4.398 | -1.326 |
12 | 0.385 | -0.936 | 1.817 | -0.39 | 0.922 | -1.452 | -1.326 | -0.858 | -3.124 | -4.398 | -3.124 | -4.398 | -0.258 | -1.768 | 0.896 | -1.02 |
13 | 1.041 | -1.112 | -0.006 | -0.437 | -0.39 | -4.398 | -2.582 | -3.124 | 1.52 | -2.582 | 1.322 | -0.656 | -1.02 | -2.232 | -0.106 | -2.232 |
14 | -2.582 | 2.106 | -2.232 | -3.124 | -4.398 | -0.719 | -4.398 | -4.398 | -2.582 | 1.726 | -4.398 | -4.398 | -4.398 | 0.246 | -4.398 | -4.398 |
15 | -3.124 | -2.232 | -4.398 | -4.398 | 2.09 | 0.802 | -0.656 | 1.561 | -2.582 | -4.398 | -3.124 | -4.398 | -3.124 | -4.398 | -4.398 | -4.398 |
16 | 0.142 | -0.179 | -0.072 | 1.674 | -2.582 | -1.973 | -4.398 | 0.758 | -4.398 | -2.582 | -2.582 | -0.858 | -0.786 | -1.326 | -1.598 | 1.355 |
17 | -1.452 | -2.232 | 0.294 | -4.398 | -1.598 | -4.398 | 0.056 | -3.124 | -1.973 | -2.582 | -0.006 | -4.398 | -2.232 | -1.598 | 2.429 | -2.232 |
18 | -1.452 | -2.582 | -2.582 | -1.213 | -3.124 | -1.768 | -4.398 | -1.768 | 0.467 | 1.983 | -1.452 | 1.732 | -4.398 | -3.124 | -4.398 | -2.232 |
19 | -0.3 | -0.719 | -1.02 | -1.213 | 0.427 | 1.395 | -1.598 | 0.58 | -3.124 | -2.232 | -3.124 | -1.973 | -0.344 | 0.816 | -0.006 | 0.816 |
20 | -0.179 | -0.344 | 0.025 | -0.786 | -0.006 | 1.106 | -1.768 | 0.995 | -1.768 | -0.656 | -0.786 | -0.786 | -0.786 | 0.487 | 0.195 | 0.169 |