Model info
| Transcription factor | TP73 (GeneCards) | ||||||||
| Model | P73_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 19 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dddCWWGYYMMdRCWdGYh | ||||||||
| Best auROC (human) | 0.996 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | p53-related factors {6.3.1} | ||||||||
| TF subfamily | p73 {6.3.1.0.3} | ||||||||
| HGNC | HGNC:12003 | ||||||||
| EntrezGene | GeneID:7161 (SSTAR profile) | ||||||||
| UniProt ID | P73_HUMAN | ||||||||
| UniProt AC | O15350 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | TP73 expression | ||||||||
| ReMap ChIP-seq dataset list | TP73 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 178.0 | 80.0 | 160.0 | 82.0 |
| 02 | 161.0 | 46.0 | 200.0 | 93.0 |
| 03 | 195.0 | 38.0 | 190.0 | 77.0 |
| 04 | 17.0 | 437.0 | 20.0 | 26.0 |
| 05 | 305.0 | 74.0 | 34.0 | 87.0 |
| 06 | 156.0 | 6.0 | 39.0 | 299.0 |
| 07 | 4.0 | 5.0 | 488.0 | 3.0 |
| 08 | 34.0 | 240.0 | 7.0 | 219.0 |
| 09 | 68.0 | 293.0 | 37.0 | 102.0 |
| 10 | 61.0 | 370.0 | 42.0 | 27.0 |
| 11 | 309.0 | 106.0 | 5.0 | 80.0 |
| 12 | 142.0 | 43.0 | 257.0 | 58.0 |
| 13 | 278.0 | 19.0 | 157.0 | 46.0 |
| 14 | 5.0 | 477.0 | 12.0 | 6.0 |
| 15 | 251.0 | 80.0 | 13.0 | 156.0 |
| 16 | 55.0 | 48.0 | 55.0 | 342.0 |
| 17 | 17.0 | 6.0 | 470.0 | 7.0 |
| 18 | 44.0 | 250.0 | 21.0 | 185.0 |
| 19 | 94.0 | 255.0 | 41.0 | 110.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.35 | -0.439 | 0.244 | -0.415 |
| 02 | 0.25 | -0.979 | 0.465 | -0.291 |
| 03 | 0.44 | -1.163 | 0.415 | -0.477 |
| 04 | -1.92 | 1.243 | -1.77 | -1.525 |
| 05 | 0.885 | -0.516 | -1.27 | -0.357 |
| 06 | 0.219 | -2.819 | -1.138 | 0.865 |
| 07 | -3.126 | -2.961 | 1.353 | -3.325 |
| 08 | -1.27 | 0.646 | -2.694 | 0.555 |
| 09 | -0.599 | 0.845 | -1.189 | -0.201 |
| 10 | -0.705 | 1.077 | -1.067 | -1.489 |
| 11 | 0.898 | -0.163 | -2.961 | -0.439 |
| 12 | 0.126 | -1.044 | 0.714 | -0.754 |
| 13 | 0.793 | -1.818 | 0.225 | -0.979 |
| 14 | -2.961 | 1.33 | -2.234 | -2.819 |
| 15 | 0.691 | -0.439 | -2.163 | 0.219 |
| 16 | -0.805 | -0.938 | -0.805 | 0.999 |
| 17 | -1.92 | -2.819 | 1.315 | -2.694 |
| 18 | -1.022 | 0.687 | -1.725 | 0.388 |
| 19 | -0.281 | 0.707 | -1.09 | -0.126 |