Model info
| Transcription factor | TP73 (GeneCards) | ||||||||
| Model | P73_HUMAN.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | vdRCWWGYCYRR | ||||||||
| Best auROC (human) | 0.908 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | p53-related factors {6.3.1} | ||||||||
| TF subfamily | p73 {6.3.1.0.3} | ||||||||
| HGNC | HGNC:12003 | ||||||||
| EntrezGene | GeneID:7161 (SSTAR profile) | ||||||||
| UniProt ID | P73_HUMAN | ||||||||
| UniProt AC | O15350 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | TP73 expression | ||||||||
| ReMap ChIP-seq dataset list | TP73 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 98.0 | 96.0 | 229.0 | 77.0 |
| 02 | 198.0 | 44.0 | 170.0 | 88.0 |
| 03 | 252.0 | 5.0 | 221.0 | 22.0 |
| 04 | 1.0 | 495.0 | 4.0 | 0.0 |
| 05 | 382.0 | 41.0 | 16.0 | 61.0 |
| 06 | 140.0 | 13.0 | 56.0 | 291.0 |
| 07 | 2.0 | 3.0 | 493.0 | 2.0 |
| 08 | 4.0 | 315.0 | 1.0 | 180.0 |
| 09 | 5.0 | 472.0 | 6.0 | 17.0 |
| 10 | 65.0 | 109.0 | 2.0 | 324.0 |
| 11 | 103.0 | 31.0 | 312.0 | 54.0 |
| 12 | 110.0 | 9.0 | 277.0 | 104.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.24 | -0.26 | 0.6 | -0.477 |
| 02 | 0.455 | -1.022 | 0.304 | -0.346 |
| 03 | 0.695 | -2.961 | 0.565 | -1.681 |
| 04 | -3.903 | 1.367 | -3.126 | -4.4 |
| 05 | 1.109 | -1.09 | -1.975 | -0.705 |
| 06 | 0.112 | -2.163 | -0.788 | 0.838 |
| 07 | -3.573 | -3.325 | 1.363 | -3.573 |
| 08 | -3.126 | 0.917 | -3.903 | 0.361 |
| 09 | -2.961 | 1.32 | -2.819 | -1.92 |
| 10 | -0.643 | -0.135 | -3.573 | 0.945 |
| 11 | -0.191 | -1.358 | 0.907 | -0.823 |
| 12 | -0.126 | -2.484 | 0.789 | -0.181 |