We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTP73
(GeneCards)
ModelP73_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
1
ConsensusvdRCWWGYCYRR
Best auROC (human)0.908
Best auROC (mouse)
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)
Aligned words500
TF familyp53-related factors {6.3.1}
TF subfamilyp73 {6.3.1.0.3}
HGNCHGNC:12003
EntrezGeneGeneID:7161
(SSTAR profile)
UniProt IDP73_HUMAN
UniProt ACO15350
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.814909999999999
0.0005 5.78941
0.0001 7.598125
GTEx tissue expression atlas TP73 expression
ReMap ChIP-seq dataset list TP73 datasets
Motifs in JASPAR
PCM
ACGT
0198.096.0229.077.0
02198.044.0170.088.0
03252.05.0221.022.0
041.0495.04.00.0
05382.041.016.061.0
06140.013.056.0291.0
072.03.0493.02.0
084.0315.01.0180.0
095.0472.06.017.0
1065.0109.02.0324.0
11103.031.0312.054.0
12110.09.0277.0104.0
PWM
ACGT
01-0.24-0.260.6-0.477
020.455-1.0220.304-0.346
030.695-2.9610.565-1.681
04-3.9031.367-3.126-4.4
051.109-1.09-1.975-0.705
060.112-2.163-0.7880.838
07-3.573-3.3251.363-3.573
08-3.1260.917-3.9030.361
09-2.9611.32-2.819-1.92
10-0.643-0.135-3.5730.945
11-0.191-1.3580.907-0.823
12-0.126-2.4840.789-0.181