We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPATZ1
(GeneCards)
ModelPATZ1_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length24
Quality
C
Motif rank
0
ConsensusnvRRGGMGGGGvvdRRvvdRRvvb
Best auROC (human)0.926
Best auROC (mouse)
Peak sets in benchmark (human)6
Peak sets in benchmark (mouse)
Aligned words534
TF familyFactors with multiple dispersed zinc fingers {2.3.4}
TF subfamilyMAZ-like factors {2.3.4.8}
HGNCHGNC:13071
EntrezGeneGeneID:23598
(SSTAR profile)
UniProt IDPATZ1_HUMAN
UniProt ACQ9HBE1
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.22221
0.0005 7.308060000000001
0.0001 11.74966
GTEx tissue expression atlas PATZ1 expression
ReMap ChIP-seq dataset list PATZ1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0123.010.057.01.027.028.080.013.052.022.071.08.08.035.058.05.0
0247.02.059.02.035.07.043.010.043.023.0180.020.06.00.021.00.0
0310.06.078.037.04.02.019.07.085.06.0200.012.03.02.027.00.0
043.06.091.02.03.00.010.03.014.07.0295.08.00.014.036.06.0
050.02.018.00.02.03.021.01.03.07.0421.01.00.00.019.00.0
064.00.00.01.07.04.00.01.0193.0207.04.075.01.00.00.01.0
0766.03.0132.04.018.00.0183.010.00.00.03.01.02.01.067.08.0
082.01.043.040.00.00.01.03.08.08.0331.038.05.00.016.02.0
096.01.08.00.02.00.06.01.037.02.0343.09.04.00.076.03.0
106.03.037.03.02.00.01.00.052.08.0362.011.02.01.08.02.0
1117.013.028.04.03.06.00.03.0161.0120.0108.019.04.07.01.04.0
1264.027.083.011.017.059.042.028.026.049.048.014.02.03.023.02.0
1317.08.049.035.043.025.043.027.064.034.087.011.05.03.029.018.0
1418.012.093.06.08.05.050.07.035.025.0144.04.015.015.052.09.0
1523.03.046.04.011.02.036.08.077.025.0218.019.04.02.019.01.0
1639.016.057.03.09.06.016.01.0108.051.0146.014.07.03.020.02.0
1781.015.059.08.021.010.029.016.060.055.0105.019.03.06.010.01.0
1813.08.092.052.010.07.040.029.057.08.0115.023.09.08.021.06.0
1913.05.066.05.09.03.013.06.051.027.0170.020.012.03.091.04.0
2010.06.065.04.03.05.029.01.033.018.0261.028.03.03.028.01.0
2126.04.017.02.014.01.014.03.0160.052.0145.026.07.05.016.06.0
2291.014.098.04.012.014.031.05.044.038.096.014.013.05.017.02.0
2327.026.055.052.09.015.033.014.026.064.0110.042.04.09.07.05.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.298-1.110.599-3.122-0.14-0.1040.936-0.8560.508-0.3420.818-1.324-1.3240.1160.617-1.766
020.408-2.580.634-2.580.116-1.4510.32-1.110.32-0.2981.745-0.435-1.596-4.397-0.388-4.397
03-1.11-1.5960.9110.171-1.971-2.58-0.486-1.4510.997-1.5961.85-0.934-2.23-2.58-0.14-4.397
04-2.23-1.5961.065-2.58-2.23-4.397-1.11-2.23-0.784-1.4512.238-1.324-4.397-0.7840.144-1.596
05-4.397-2.58-0.539-4.397-2.58-2.23-0.388-3.122-2.23-1.4512.593-3.122-4.397-4.397-0.486-4.397
06-1.971-4.397-4.397-3.122-1.451-1.971-4.397-3.1221.8141.884-1.9710.872-3.122-4.397-4.397-3.122
070.745-2.231.435-1.971-0.539-4.3971.761-1.11-4.397-4.397-2.23-3.122-2.58-3.1220.76-1.324
08-2.58-3.1220.320.248-4.397-4.397-3.122-2.23-1.324-1.3242.3530.197-1.766-4.397-0.654-2.58
09-1.596-3.122-1.324-4.397-2.58-4.397-1.596-3.1220.171-2.582.388-1.211-1.971-4.3970.885-2.23
10-1.596-2.230.171-2.23-2.58-4.397-3.122-4.3970.508-1.3242.442-1.018-2.58-3.122-1.324-2.58
11-0.595-0.856-0.104-1.971-2.23-1.596-4.397-2.231.6331.341.235-0.486-1.971-1.451-3.122-1.971
120.715-0.140.973-1.018-0.5950.6340.296-0.104-0.1770.4490.429-0.784-2.58-2.23-0.298-2.58
13-0.595-1.3240.4490.1160.32-0.2160.32-0.140.7150.0871.02-1.018-1.766-2.23-0.07-0.539
14-0.539-0.9341.086-1.596-1.324-1.7660.469-1.4510.116-0.2161.522-1.971-0.717-0.7170.508-1.211
15-0.298-2.230.387-1.971-1.018-2.580.144-1.3240.898-0.2161.936-0.486-1.971-2.58-0.486-3.122
160.223-0.6540.599-2.23-1.211-1.596-0.654-3.1221.2350.4891.536-0.784-1.451-2.23-0.435-2.58
170.949-0.7170.634-1.324-0.388-1.11-0.07-0.6540.650.5641.207-0.486-2.23-1.596-1.11-3.122
18-0.856-1.3241.0760.508-1.11-1.4510.248-0.070.599-1.3241.298-0.298-1.211-1.324-0.388-1.596
19-0.856-1.7660.745-1.766-1.211-2.23-0.856-1.5960.489-0.141.688-0.435-0.934-2.231.065-1.971
20-1.11-1.5960.73-1.971-2.23-1.766-0.07-3.1220.058-0.5392.116-0.104-2.23-2.23-0.104-3.122
21-0.177-1.971-0.595-2.58-0.784-3.122-0.784-2.231.6270.5081.529-0.177-1.451-1.766-0.654-1.596
221.065-0.7841.139-1.971-0.934-0.784-0.004-1.7660.3430.1971.118-0.784-0.856-1.766-0.595-2.58
23-0.14-0.1770.5640.508-1.211-0.7170.058-0.784-0.1770.7151.2540.296-1.971-1.211-1.451-1.766