We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPax3
ModelPAX3_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusnnbvdnWAATbdvddd
Best auROC (human)
Best auROC (mouse)0.817
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words447
TF familyPaired plus homeo domain {3.2.1}
TF subfamilyPAX-3/7 {3.2.1.1}
MGIMGI:97487
EntrezGeneGeneID:18505
(SSTAR profile)
UniProt IDPAX3_MOUSE
UniProt ACP24610
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.81816
0.0005 12.15701
0.0001 14.802510000000002
GTEx tissue expression atlas Pax3 expression
Motifs in JASPAR
MA0780.1 (PAX3; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0115.044.034.013.069.026.025.023.012.027.031.012.015.021.065.013.0
0212.025.019.055.017.039.014.048.022.036.029.068.010.012.019.020.0
0325.016.013.07.052.011.030.019.030.020.017.014.023.015.0145.08.0
0423.017.068.022.030.014.09.09.049.026.082.048.06.03.035.04.0
0514.071.016.07.024.012.03.021.084.048.029.033.06.07.068.02.0
0657.01.010.060.013.05.08.0112.043.04.08.061.04.02.04.053.0
07113.03.01.00.011.00.00.01.028.00.01.01.0277.00.08.01.0
08425.00.03.01.03.00.00.00.08.02.00.00.03.00.00.00.0
0910.010.06.0413.00.00.00.02.00.00.00.03.00.00.00.01.0
100.03.06.01.01.01.01.07.01.01.01.03.05.093.0124.0197.0
111.00.05.01.055.08.021.014.056.019.037.020.016.015.0161.016.0
1240.012.073.03.025.07.03.07.0152.031.023.018.011.015.024.01.0
1330.011.014.0173.030.09.03.023.054.021.019.029.04.04.012.09.0
1454.07.016.041.013.011.02.019.022.06.09.011.012.016.019.0187.0
1560.05.011.025.021.08.04.07.016.010.011.09.0127.022.029.080.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.6060.4540.198-0.7450.901-0.066-0.105-0.187-0.823-0.0290.107-0.823-0.606-0.2770.841-0.745
02-0.823-0.105-0.3750.675-0.4840.334-0.6730.54-0.2310.2550.0410.886-0.999-0.823-0.375-0.324
03-0.105-0.543-0.745-1.340.619-0.9070.075-0.3750.075-0.324-0.484-0.673-0.187-0.6061.64-1.213
04-0.187-0.4840.886-0.2310.075-0.673-1.1-1.10.56-0.0661.0720.54-1.486-2.1210.227-1.862
05-0.6730.929-0.543-1.34-0.145-0.823-2.121-0.2771.0960.540.0410.169-1.486-1.340.886-2.472
060.711-3.016-0.9990.762-0.745-1.656-1.2131.3830.431-1.862-1.2130.778-1.862-2.472-1.8620.638
071.392-2.121-3.016-4.304-0.907-4.304-4.304-3.0160.007-4.304-3.016-3.0162.286-4.304-1.213-3.016
082.714-4.304-2.121-3.016-2.121-4.304-4.304-4.304-1.213-2.472-4.304-4.304-2.121-4.304-4.304-4.304
09-0.999-0.999-1.4862.685-4.304-4.304-4.304-2.472-4.304-4.304-4.304-2.121-4.304-4.304-4.304-3.016
10-4.304-2.121-1.486-3.016-3.016-3.016-3.016-1.34-3.016-3.016-3.016-2.121-1.6561.1981.4841.946
11-3.016-4.304-1.656-3.0160.675-1.213-0.277-0.6730.693-0.3750.282-0.324-0.543-0.6061.745-0.543
120.359-0.8230.957-2.121-0.105-1.34-2.121-1.341.6870.107-0.187-0.428-0.907-0.606-0.145-3.016
130.075-0.907-0.6731.8160.075-1.1-2.121-0.1870.657-0.277-0.3750.041-1.862-1.862-0.823-1.1
140.657-1.34-0.5430.384-0.745-0.907-2.472-0.375-0.231-1.486-1.1-0.907-0.823-0.543-0.3751.894
150.762-1.656-0.907-0.105-0.277-1.213-1.862-1.34-0.543-0.999-0.907-1.11.508-0.2310.0411.048