We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPAX4
(GeneCards)
ModelPAX4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensushdhhTAATKMdh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words934
TF familyPaired plus homeo domain {3.2.1}
TF subfamilyPAX-4/6 {3.2.1.2}
HGNCHGNC:8618
EntrezGeneGeneID:5078
(SSTAR profile)
UniProt IDPAX4_HUMAN
UniProt ACO43316
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.779275
0.0005 6.483689999999999
0.0001 7.78688
GTEx tissue expression atlas PAX4 expression
ReMap ChIP-seq dataset list PAX4 datasets
Motifs in JASPAR
PCM
ACGT
01196.702107.099.561531.064
02401.611118.16168.007246.548
03482.12176.882124.803150.522
04198.458415.16179.632241.076
050.08.9280.0925.399
06790.52620.0882.976120.737
07870.1335.2080.058.986
080.035.9231.488896.916
0959.89136.827167.024670.585
10403.553412.48161.75156.543
11357.879.659414.76582.103
12238.762365.1381.891248.543
PWM
ACGT
01-0.17-0.772-0.8430.817
020.539-0.674-0.3270.054
030.721-0.276-0.62-0.435
04-0.1620.572-1.0620.031
05-4.924-3.096-4.9241.371
061.214-2.379-3.916-0.653
071.31-3.527-4.924-1.355
08-4.924-1.833-4.2981.34
09-1.34-1.809-0.3331.05
100.5440.566-1.31-1.396
110.424-1.0620.571-1.032
120.0220.444-1.0350.062