We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPAX7
(GeneCards)
ModelPAX7_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusTAATYGATTAd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words17615
TF familyPaired plus homeo domain {3.2.1}
TF subfamilyPAX-3/7 {3.2.1.1}
HGNCHGNC:8621
EntrezGeneGeneID:5081
(SSTAR profile)
UniProt IDPAX7_HUMAN
UniProt ACP23759
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.88726
0.0005 3.4116099999999996
0.0001 6.620975
GTEx tissue expression atlas PAX7 expression
ReMap ChIP-seq dataset list PAX7 datasets
Motifs in JASPAR
PCM
ACGT
012308.584459.655487.51211889.531
0215055.20117.57937.49235.01
0314528.99119.28518.044578.962
0437.95742.2746.61215018.443
0599.9426233.808155.3398656.193
06161.98119.29314955.9138.095
0715052.26120.84463.1519.026
0865.40215.0912.57815052.213
0930.94835.94119.1315059.263
1012997.195489.861519.141139.086
114950.4172033.2422229.9645931.659
PWM
ACGT
01-0.494-2.104-2.0461.144
021.38-5.245-4.553-4.618
031.344-5.163-5.222-1.874
04-4.542-4.44-4.3481.377
05-3.6110.498-3.1790.827
06-3.138-5.1631.373-5.888
071.38-5.093-4.057-5.803
08-4.023-5.378-5.5331.38
09-4.733-4.593-5.171.38
101.233-2.041-1.983-1.2
110.268-0.621-0.5290.449