We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCBFB
(GeneCards)
ModelPEBB_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
C
Motif rank
0
ConsensusYbTGTGGTYdb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words23
TF family
TF subfamily
HGNCHGNC:1539
EntrezGeneGeneID:865
(SSTAR profile)
UniProt IDPEBB_HUMAN
UniProt ACQ13951
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.1223849999999995
0.0005 5.828165
0.0001 7.228315
GTEx tissue expression atlas CBFB expression
ReMap ChIP-seq dataset list CBFB datasets
Motifs in JASPAR
PCM
ACGT
010.3486.0644.11212.476
020.9769.6183.0679.339
030.6970.01.11521.188
040.03.48518.6790.836
050.05.7150.017.285
061.6730.021.3270.0
070.8360.022.1640.0
080.00.05.43617.564
091.2559.7581.11510.873
108.7820.8364.3219.061
111.2557.3887.8066.552
PWM
ACGT
01-1.7530.047-0.2890.708
02-1.3120.465-0.5290.438
03-1.484-2.121-1.2361.213
04-2.121-0.4261.091-1.394
05-2.121-0.005-2.1211.017
06-0.978-2.1211.219-2.121
07-1.394-2.1211.256-2.121
08-2.121-2.121-0.0491.032
09-1.1650.478-1.2360.579
100.381-1.394-0.2470.41
11-1.1650.2240.2740.116