We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPOU1F1
(GeneCards)
ModelPIT1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
C
Motif rank
0
ConsensusbWMWTGvAWATWh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words39
TF familyPOU domain factors {3.1.10}
TF subfamilyPOU1 (Pit-1-like factors) {3.1.10.1}
HGNCHGNC:9210
EntrezGeneGeneID:5449
(SSTAR profile)
UniProt IDPIT1_HUMAN
UniProt ACP28069
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.93286
0.0005 6.63302
0.0001 8.048425
GTEx tissue expression atlas POU1F1 expression
ReMap ChIP-seq dataset list POU1F1 datasets
Motifs in JASPAR
PCM
ACGT
013.0916.7944.55813.368
028.815.3841.71321.903
0315.17316.8864.7720.979
0424.9624.0380.08.81
053.1810.00.034.629
060.6120.037.1980.0
0721.5366.2415.1394.895
0834.7510.00.03.059
0910.2780.01.83525.696
1033.2830.01.2243.304
119.9110.00.027.899
1220.190.05.87311.747
136.30211.8084.95614.745
PWM
ACGT
01-0.9520.536-0.6390.321
02-0.064-0.499-1.3740.789
030.440.541-0.601-1.703
040.915-0.739-2.434-0.064
05-0.93-2.434-2.4341.233
06-1.919-2.4341.302-2.434
070.773-0.371-0.538-0.58
081.236-2.434-2.434-0.96
090.077-2.434-1.3290.943
101.194-2.434-1.581-0.9
110.043-2.434-2.4341.023
120.711-2.434-0.4240.2
13-0.3630.205-0.5690.413