We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPOU2F1
(GeneCards)
ModelPO2F1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusRnKbvhATGSAAWhRh
Best auROC (human)0.766
Best auROC (mouse)0.669
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)14
Aligned words134
TF familyPOU domain factors {3.1.10}
TF subfamilyPOU2 (Oct-1/2-like factors) {3.1.10.2}
HGNCHGNC:9212
EntrezGeneGeneID:5451
(SSTAR profile)
UniProt IDPO2F1_HUMAN
UniProt ACP14859
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.57651
0.0005 6.44026
0.0001 8.212610000000002
GTEx tissue expression atlas POU2F1 expression
ReMap ChIP-seq dataset list POU2F1 datasets
Motifs in JASPAR
PCM
ACGT
0185.015.021.013.0
0258.023.023.030.0
0310.06.040.078.0
0411.049.045.029.0
0540.018.063.013.0
0666.022.05.041.0
07127.05.01.01.0
085.02.01.0126.0
098.00.0126.00.0
102.062.057.013.0
11123.03.04.04.0
12110.05.017.02.0
1372.09.07.046.0
1416.053.08.057.0
1581.019.023.011.0
1662.011.010.051.0
PWM
ACGT
010.91-0.761-0.446-0.892
020.534-0.36-0.36-0.106
03-1.129-1.570.1720.825
04-1.0440.3690.286-0.139
050.172-0.5910.615-0.892
060.661-0.402-1.7190.196
071.306-1.719-2.748-2.748
08-1.719-2.377-2.7481.299
09-1.326-3.3451.299-3.345
10-2.3770.5990.517-0.892
111.275-2.107-1.894-1.894
121.164-1.719-0.645-2.377
130.746-1.223-1.440.307
14-0.7010.446-1.3260.517
150.862-0.541-0.36-1.044
160.599-1.044-1.1290.408