We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPOU2F2
(GeneCards)
ModelPO2F2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusndhATGCAWAKnnvn
Best auROC (human)0.925
Best auROC (mouse)
Peak sets in benchmark (human)14
Peak sets in benchmark (mouse)
Aligned words504
TF familyPOU domain factors {3.1.10}
TF subfamilyPOU2 (Oct-1/2-like factors) {3.1.10.2}
HGNCHGNC:9213
EntrezGeneGeneID:5452
(SSTAR profile)
UniProt IDPO2F2_HUMAN
UniProt ACP09086
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.41236
0.0005 12.19541
0.0001 15.95816
GTEx tissue expression atlas POU2F2 expression
ReMap ChIP-seq dataset list POU2F2 datasets
Motifs in JASPAR
MA0507.1 (POU2F2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0188.05.027.025.068.012.020.038.048.019.021.022.030.012.032.031.0
0241.074.016.0103.07.07.05.029.011.041.04.044.01.047.07.061.0
0352.05.03.00.0159.05.03.02.027.04.01.00.0229.05.01.02.0
043.04.014.0446.04.01.01.013.02.01.01.04.01.00.01.02.0
050.00.09.01.00.00.05.01.00.00.015.02.06.00.0442.017.0
063.02.01.00.00.00.00.00.036.0395.04.036.01.017.00.03.0
0737.00.00.03.0399.00.07.08.03.01.01.00.038.00.00.01.0
08275.032.053.0117.00.00.01.00.00.04.01.03.010.00.00.02.0
09266.08.010.01.029.01.06.00.037.06.08.04.0106.04.08.04.0
1036.037.060.0305.03.05.06.05.02.05.015.010.00.05.00.04.0
118.07.06.020.015.013.014.010.029.017.023.012.071.031.0136.086.0
1234.034.030.025.036.013.09.010.066.050.034.029.030.043.023.032.0
1346.026.077.017.083.018.017.022.024.032.036.04.030.023.036.07.0
1434.047.052.050.035.034.012.018.033.044.060.029.011.03.024.012.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
011.031-1.766-0.14-0.2160.775-0.934-0.4350.1970.429-0.486-0.388-0.342-0.036-0.9340.027-0.004
020.2730.859-0.6541.188-1.451-1.451-1.766-0.07-1.0180.273-1.9710.343-3.1220.408-1.4510.667
030.508-1.766-2.23-4.3971.621-1.766-2.23-2.58-0.14-1.971-3.122-4.3971.985-1.766-3.122-2.58
04-2.23-1.971-0.7842.651-1.971-3.122-3.122-0.856-2.58-3.122-3.122-1.971-3.122-4.397-3.122-2.58
05-4.397-4.397-1.211-3.122-4.397-4.397-1.766-3.122-4.397-4.397-0.717-2.58-1.596-4.3972.642-0.595
06-2.23-2.58-3.122-4.397-4.397-4.397-4.397-4.3970.1442.529-1.9710.144-3.122-0.595-4.397-2.23
070.171-4.397-4.397-2.232.54-4.397-1.451-1.324-2.23-3.122-3.122-4.3970.197-4.397-4.397-3.122
082.1680.0270.5271.315-4.397-4.397-3.122-4.397-4.397-1.971-3.122-2.23-1.11-4.397-4.397-2.58
092.135-1.324-1.11-3.122-0.07-3.122-1.596-4.3970.171-1.596-1.324-1.9711.217-1.971-1.324-1.971
100.1440.1710.652.271-2.23-1.766-1.596-1.766-2.58-1.766-0.717-1.11-4.397-1.766-4.397-1.971
11-1.324-1.451-1.596-0.435-0.717-0.856-0.784-1.11-0.07-0.595-0.298-0.9340.818-0.0041.4651.008
120.0870.087-0.036-0.2160.144-0.856-1.211-1.110.7450.4690.087-0.07-0.0360.32-0.2980.027
130.387-0.1770.898-0.5950.973-0.539-0.595-0.342-0.2560.0270.144-1.971-0.036-0.2980.144-1.451
140.0870.4080.5080.4690.1160.087-0.934-0.5390.0580.3430.65-0.07-1.018-2.23-0.256-0.934