We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPOU2F2
(GeneCards)
ModelPO2F2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusdhATGCAWAKd
Best auROC (human)0.919
Best auROC (mouse)
Peak sets in benchmark (human)14
Peak sets in benchmark (mouse)
Aligned words501
TF familyPOU domain factors {3.1.10}
TF subfamilyPOU2 (Oct-1/2-like factors) {3.1.10.2}
HGNCHGNC:9213
EntrezGeneGeneID:5452
(SSTAR profile)
UniProt IDPO2F2_HUMAN
UniProt ACP09086
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.43999
0.0005 6.289745
0.0001 7.987635
GTEx tissue expression atlas POU2F2 expression
ReMap ChIP-seq dataset list POU2F2 datasets
Motifs in JASPAR
PCM
ACGT
01214.076.0106.0104.0
0261.0199.035.0205.0
03451.032.013.04.0
048.09.021.0462.0
054.02.0482.012.0
0638.0412.017.033.0
07478.05.03.014.0
08295.037.043.0125.0
09457.013.025.05.0
1042.049.061.0348.0
1198.076.0199.0127.0
PWM
ACGT
010.533-0.49-0.163-0.181
02-0.7050.46-1.2420.49
031.274-1.328-2.163-3.126
04-2.584-2.484-1.7251.298
05-3.126-3.5731.34-2.234
06-1.1631.184-1.92-1.298
071.332-2.961-3.325-2.096
080.852-1.189-1.0440.0
091.287-2.163-1.561-2.961
10-1.067-0.918-0.7051.016
11-0.24-0.490.460.016