Model info
| Transcription factor | POU2F3 (GeneCards) | ||||||||
| Model | PO2F3_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dWYAYGCWWRWdhd | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 301 | ||||||||
| TF family | POU domain factors {3.1.10} | ||||||||
| TF subfamily | POU2 (Oct-1/2-like factors) {3.1.10.2} | ||||||||
| HGNC | HGNC:19864 | ||||||||
| EntrezGene | GeneID:25833 (SSTAR profile) | ||||||||
| UniProt ID | PO2F3_HUMAN | ||||||||
| UniProt AC | Q9UKI9 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | POU2F3 expression | ||||||||
| ReMap ChIP-seq dataset list | POU2F3 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 92.0 | 37.0 | 105.0 | 66.0 |
| 02 | 87.0 | 11.0 | 20.0 | 182.0 |
| 03 | 9.0 | 103.0 | 10.0 | 178.0 |
| 04 | 295.25 | 2.25 | 1.25 | 1.25 |
| 05 | 7.0 | 91.0 | 6.0 | 196.0 |
| 06 | 4.0 | 1.0 | 279.0 | 16.0 |
| 07 | 5.0 | 254.0 | 11.0 | 30.0 |
| 08 | 186.0 | 5.0 | 1.0 | 108.0 |
| 09 | 161.0 | 13.0 | 12.0 | 114.0 |
| 10 | 180.0 | 42.0 | 60.0 | 18.0 |
| 11 | 97.75 | 2.75 | 27.75 | 171.75 |
| 12 | 40.25 | 37.25 | 71.25 | 151.25 |
| 13 | 74.0 | 36.0 | 22.0 | 168.0 |
| 14 | 78.25 | 30.25 | 144.25 | 47.25 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.201 | -0.688 | 0.331 | -0.125 |
| 02 | 0.146 | -1.817 | -1.272 | 0.875 |
| 03 | -1.992 | 0.312 | -1.9 | 0.853 |
| 04 | 1.356 | -3.035 | -3.352 | -3.352 |
| 05 | -2.205 | 0.19 | -2.331 | 0.949 |
| 06 | -2.645 | -3.45 | 1.3 | -1.478 |
| 07 | -2.476 | 1.207 | -1.817 | -0.889 |
| 08 | 0.897 | -2.476 | -3.45 | 0.359 |
| 09 | 0.754 | -1.667 | -1.739 | 0.412 |
| 10 | 0.865 | -0.565 | -0.218 | -1.37 |
| 11 | 0.261 | -2.907 | -0.963 | 0.818 |
| 12 | -0.606 | -0.681 | -0.05 | 0.692 |
| 13 | -0.013 | -0.714 | -1.182 | 0.796 |
| 14 | 0.042 | -0.881 | 0.645 | -0.451 |