Transcription factor | POU3F1 (GeneCards) | ||||||||
Model | PO3F1_HUMAN.H11MO.0.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 14 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | vRTKSTWATGCWWd | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 16 | ||||||||
TF family | POU domain factors {3.1.10} | ||||||||
TF subfamily | POU3 (Oct-6-like factors) {3.1.10.3} | ||||||||
HGNC | HGNC:9214 | ||||||||
EntrezGene | GeneID:5453 (SSTAR profile) | ||||||||
UniProt ID | PO3F1_HUMAN | ||||||||
UniProt AC | Q03052 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | POU3F1 expression | ||||||||
ReMap ChIP-seq dataset list | POU3F1 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 4.875 | 5.148 | 4.193 | 0.784 |
02 | 8.864 | 0.0 | 3.75 | 2.386 |
03 | 1.364 | 0.0 | 0.682 | 12.955 |
04 | 1.364 | 0.0 | 5.864 | 7.773 |
05 | 1.023 | 4.5 | 7.773 | 1.705 |
06 | 5.864 | 0.0 | 0.0 | 9.136 |
07 | 9.068 | 0.0 | 1.227 | 4.705 |
08 | 14.318 | 0.0 | 0.0 | 0.682 |
09 | 0.909 | 0.227 | 0.909 | 12.955 |
10 | 1.364 | 0.682 | 12.273 | 0.682 |
11 | 0.909 | 11.818 | 2.273 | 0.0 |
12 | 9.0 | 0.0 | 2.727 | 3.273 |
13 | 8.818 | 0.682 | 1.591 | 3.909 |
14 | 6.477 | 1.295 | 3.205 | 4.023 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.226 | 0.274 | 0.095 | -1.109 |
02 | 0.768 | -1.878 | 0.0 | -0.368 |
03 | -0.774 | -1.878 | -1.181 | 1.125 |
04 | -0.774 | -1.878 | 0.39 | 0.646 |
05 | -0.957 | 0.157 | 0.646 | -0.62 |
06 | 0.39 | -1.878 | -1.878 | 0.796 |
07 | 0.789 | -1.878 | -0.844 | 0.195 |
08 | 1.22 | -1.878 | -1.878 | -1.181 |
09 | -1.026 | -1.588 | -1.026 | 1.125 |
10 | -0.774 | -1.181 | 1.073 | -1.181 |
11 | -1.026 | 1.038 | -0.406 | -1.878 |
12 | 0.782 | -1.878 | -0.263 | -0.114 |
13 | 0.763 | -1.181 | -0.669 | 0.035 |
14 | 0.48 | -0.808 | -0.131 | 0.06 |