PO3F1_HUMAN.H11MO.0.C motif - HOmo sapiens COmprehensive MOdel COllection

We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.

Model info

Transcription factor

POU3F1
(GeneCards)

Model

PO3F1_HUMAN.H11MO.0.C

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

Integrative

Model release

HOCOMOCOv9

Model length

14

Quality

C

Motif rank

0

Consensus

vRTKSTWATGCWWd

Best auROC (human)

Best auROC (mouse)

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

16

TF family

POU domain factors {3.1.10}

TF subfamily

POU3 (Oct-6-like factors) {3.1.10.3}

HGNC

EntrezGene

GeneID:5453
(SSTAR profile)

UniProt ID

UniProt AC

Q03052
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	5.68566
0.0005	6.32821
0.0001	7.66016

GTEx tissue expression atlas

POU3F1 expression

ReMap ChIP-seq dataset list

POU3F1 datasets

Motifs in JASPAR

MA0786.1 (POU3F1; Homo sapiens)

PCM

	A	C	G	T
01	4.875	5.148	4.193	0.784
02	8.864	0.0	3.75	2.386
03	1.364	0.0	0.682	12.955
04	1.364	0.0	5.864	7.773
05	1.023	4.5	7.773	1.705
06	5.864	0.0	0.0	9.136
07	9.068	0.0	1.227	4.705
08	14.318	0.0	0.0	0.682
09	0.909	0.227	0.909	12.955
10	1.364	0.682	12.273	0.682
11	0.909	11.818	2.273	0.0
12	9.0	0.0	2.727	3.273
13	8.818	0.682	1.591	3.909
14	6.477	1.295	3.205	4.023

PWM

	A	C	G	T
01	0.226	0.274	0.095	-1.109
02	0.768	-1.878	0.0	-0.368
03	-0.774	-1.878	-1.181	1.125
04	-0.774	-1.878	0.39	0.646
05	-0.957	0.157	0.646	-0.62
06	0.39	-1.878	-1.878	0.796
07	0.789	-1.878	-0.844	0.195
08	1.22	-1.878	-1.878	-1.181
09	-1.026	-1.588	-1.026	1.125
10	-0.774	-1.181	1.073	-1.181
11	-1.026	1.038	-0.406	-1.878
12	0.782	-1.878	-0.263	-0.114
13	0.763	-1.181	-0.669	0.035
14	0.48	-0.808	-0.131	0.06