Model info
| Transcription factor | Pou3f1 | ||||||||
| Model | PO3F1_MOUSE.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 16 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bWhATKMAWAWKbMdd | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.789 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 10 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | POU domain factors {3.1.10} | ||||||||
| TF subfamily | POU3 (Oct-6-like factors) {3.1.10.3} | ||||||||
| MGI | MGI:101896 | ||||||||
| EntrezGene | GeneID:18991 (SSTAR profile) | ||||||||
| UniProt ID | PO3F1_MOUSE | ||||||||
| UniProt AC | P21952 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Pou3f1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 55.0 | 230.0 | 112.0 | 103.0 |
| 02 | 78.0 | 52.0 | 63.0 | 307.0 |
| 03 | 67.0 | 291.0 | 54.0 | 88.0 |
| 04 | 436.0 | 24.0 | 22.0 | 18.0 |
| 05 | 4.0 | 3.0 | 13.0 | 480.0 |
| 06 | 20.0 | 19.0 | 380.0 | 81.0 |
| 07 | 241.0 | 201.0 | 36.0 | 22.0 |
| 08 | 423.0 | 27.0 | 27.0 | 23.0 |
| 09 | 141.0 | 44.0 | 26.0 | 289.0 |
| 10 | 469.0 | 11.0 | 6.0 | 14.0 |
| 11 | 134.0 | 10.0 | 20.0 | 336.0 |
| 12 | 43.0 | 13.0 | 167.0 | 277.0 |
| 13 | 55.0 | 234.0 | 72.0 | 139.0 |
| 14 | 318.0 | 117.0 | 30.0 | 35.0 |
| 15 | 229.0 | 20.0 | 69.0 | 182.0 |
| 16 | 133.0 | 54.0 | 189.0 | 124.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.805 | 0.604 | -0.108 | -0.191 |
| 02 | -0.464 | -0.86 | -0.673 | 0.891 |
| 03 | -0.613 | 0.838 | -0.823 | -0.346 |
| 04 | 1.241 | -1.6 | -1.681 | -1.868 |
| 05 | -3.126 | -3.325 | -2.163 | 1.336 |
| 06 | -1.77 | -1.818 | 1.104 | -0.427 |
| 07 | 0.651 | 0.47 | -1.215 | -1.681 |
| 08 | 1.21 | -1.489 | -1.489 | -1.64 |
| 09 | 0.119 | -1.022 | -1.525 | 0.831 |
| 10 | 1.313 | -2.311 | -2.819 | -2.096 |
| 11 | 0.069 | -2.394 | -1.77 | 0.981 |
| 12 | -1.044 | -2.163 | 0.287 | 0.789 |
| 13 | -0.805 | 0.621 | -0.543 | 0.105 |
| 14 | 0.926 | -0.065 | -1.389 | -1.242 |
| 15 | 0.6 | -1.77 | -0.584 | 0.372 |
| 16 | 0.061 | -0.823 | 0.409 | -0.008 |