Model info
| Transcription factor | POU3F2 (GeneCards) | ||||||||
| Model | PO3F2_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 17 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | YhCATKMMWWWbYMWdv | ||||||||
| Best auROC (human) | 0.924 | ||||||||
| Best auROC (mouse) | 0.913 | ||||||||
| Peak sets in benchmark (human) | 12 | ||||||||
| Peak sets in benchmark (mouse) | 22 | ||||||||
| Aligned words | 507 | ||||||||
| TF family | POU domain factors {3.1.10} | ||||||||
| TF subfamily | POU3 (Oct-6-like factors) {3.1.10.3} | ||||||||
| HGNC | HGNC:9215 | ||||||||
| EntrezGene | GeneID:5454 (SSTAR profile) | ||||||||
| UniProt ID | PO3F2_HUMAN | ||||||||
| UniProt AC | P20265 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | POU3F2 expression | ||||||||
| ReMap ChIP-seq dataset list | POU3F2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 23.0 | 177.0 | 51.0 | 245.0 |
| 02 | 74.0 | 180.0 | 29.0 | 213.0 |
| 03 | 7.0 | 464.0 | 11.0 | 14.0 |
| 04 | 411.0 | 51.0 | 2.0 | 32.0 |
| 05 | 6.0 | 3.0 | 12.0 | 475.0 |
| 06 | 20.0 | 18.0 | 328.0 | 130.0 |
| 07 | 137.0 | 333.0 | 17.0 | 9.0 |
| 08 | 322.0 | 112.0 | 48.0 | 14.0 |
| 09 | 124.0 | 16.0 | 16.0 | 340.0 |
| 10 | 239.0 | 29.0 | 25.0 | 203.0 |
| 11 | 149.0 | 9.0 | 7.0 | 331.0 |
| 12 | 17.0 | 132.0 | 90.0 | 257.0 |
| 13 | 8.0 | 330.0 | 65.0 | 93.0 |
| 14 | 324.0 | 143.0 | 12.0 | 17.0 |
| 15 | 147.0 | 16.0 | 33.0 | 300.0 |
| 16 | 70.0 | 66.0 | 87.0 | 273.0 |
| 17 | 111.0 | 213.0 | 105.0 | 67.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.632 | 0.352 | -0.871 | 0.675 |
| 02 | -0.508 | 0.369 | -1.413 | 0.536 |
| 03 | -2.687 | 1.311 | -2.303 | -2.089 |
| 04 | 1.19 | -0.871 | -3.565 | -1.32 |
| 05 | -2.811 | -3.317 | -2.226 | 1.334 |
| 06 | -1.762 | -1.86 | 0.965 | 0.047 |
| 07 | 0.099 | 0.98 | -1.912 | -2.476 |
| 08 | 0.947 | -0.1 | -0.93 | -2.089 |
| 09 | 0.0 | -1.968 | -1.968 | 1.001 |
| 10 | 0.65 | -1.413 | -1.554 | 0.488 |
| 11 | 0.182 | -2.476 | -2.687 | 0.974 |
| 12 | -1.912 | 0.062 | -0.316 | 0.722 |
| 13 | -2.576 | 0.971 | -0.635 | -0.284 |
| 14 | 0.953 | 0.141 | -2.226 | -1.912 |
| 15 | 0.168 | -1.968 | -1.29 | 0.876 |
| 16 | -0.562 | -0.62 | -0.349 | 0.782 |
| 17 | -0.109 | 0.536 | -0.164 | -0.605 |