We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPOU3F2
(GeneCards)
ModelPO3F2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusYhCATKMMWWWbYMWdv
Best auROC (human)0.924
Best auROC (mouse)0.913
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)22
Aligned words507
TF familyPOU domain factors {3.1.10}
TF subfamilyPOU3 (Oct-6-like factors) {3.1.10.3}
HGNCHGNC:9215
EntrezGeneGeneID:5454
(SSTAR profile)
UniProt IDPO3F2_HUMAN
UniProt ACP20265
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.395009999999999
0.0005 6.32351
0.0001 8.23426
GTEx tissue expression atlas POU3F2 expression
ReMap ChIP-seq dataset list POU3F2 datasets
Motifs in JASPAR
MA0787.1 (POU3F2; Homo sapiens)
PCM
ACGT
0123.0177.051.0245.0
0274.0180.029.0213.0
037.0464.011.014.0
04411.051.02.032.0
056.03.012.0475.0
0620.018.0328.0130.0
07137.0333.017.09.0
08322.0112.048.014.0
09124.016.016.0340.0
10239.029.025.0203.0
11149.09.07.0331.0
1217.0132.090.0257.0
138.0330.065.093.0
14324.0143.012.017.0
15147.016.033.0300.0
1670.066.087.0273.0
17111.0213.0105.067.0
PWM
ACGT
01-1.6320.352-0.8710.675
02-0.5080.369-1.4130.536
03-2.6871.311-2.303-2.089
041.19-0.871-3.565-1.32
05-2.811-3.317-2.2261.334
06-1.762-1.860.9650.047
070.0990.98-1.912-2.476
080.947-0.1-0.93-2.089
090.0-1.968-1.9681.001
100.65-1.413-1.5540.488
110.182-2.476-2.6870.974
12-1.9120.062-0.3160.722
13-2.5760.971-0.635-0.284
140.9530.141-2.226-1.912
150.168-1.968-1.290.876
16-0.562-0.62-0.3490.782
17-0.1090.536-0.164-0.605