Model info
| Transcription factor | Pou3f2 | ||||||||
| Model | PO3F2_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 16 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | hhYATGMATAWKYAWd | ||||||||
| Best auROC (human) | 0.788 | ||||||||
| Best auROC (mouse) | 0.943 | ||||||||
| Peak sets in benchmark (human) | 12 | ||||||||
| Peak sets in benchmark (mouse) | 22 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | POU domain factors {3.1.10} | ||||||||
| TF subfamily | POU3 (Oct-6-like factors) {3.1.10.3} | ||||||||
| MGI | MGI:101895 | ||||||||
| EntrezGene | GeneID:18992 (SSTAR profile) | ||||||||
| UniProt ID | PO3F2_MOUSE | ||||||||
| UniProt AC | P31360 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Pou3f2 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 76.0 | 224.0 | 37.0 | 160.0 |
| 02 | 193.0 | 49.0 | 41.0 | 214.0 |
| 03 | 46.0 | 375.0 | 13.0 | 63.0 |
| 04 | 469.0 | 17.0 | 5.0 | 6.0 |
| 05 | 14.0 | 6.0 | 5.0 | 472.0 |
| 06 | 83.0 | 11.0 | 394.0 | 9.0 |
| 07 | 210.0 | 264.0 | 4.0 | 19.0 |
| 08 | 477.0 | 12.0 | 1.0 | 7.0 |
| 09 | 27.0 | 13.0 | 10.0 | 447.0 |
| 10 | 440.0 | 10.0 | 1.0 | 46.0 |
| 11 | 87.0 | 18.0 | 14.0 | 378.0 |
| 12 | 68.0 | 7.0 | 214.0 | 208.0 |
| 13 | 30.0 | 310.0 | 47.0 | 110.0 |
| 14 | 403.0 | 64.0 | 12.0 | 18.0 |
| 15 | 137.0 | 30.0 | 32.0 | 298.0 |
| 16 | 242.0 | 48.0 | 92.0 | 115.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.484 | 0.584 | -1.183 | 0.25 |
| 02 | 0.436 | -0.912 | -1.084 | 0.538 |
| 03 | -0.973 | 1.096 | -2.157 | -0.667 |
| 04 | 1.319 | -1.914 | -2.955 | -2.813 |
| 05 | -2.091 | -2.813 | -2.955 | 1.326 |
| 06 | -0.397 | -2.305 | 1.146 | -2.478 |
| 07 | 0.52 | 0.747 | -3.121 | -1.812 |
| 08 | 1.336 | -2.228 | -3.898 | -2.689 |
| 09 | -1.483 | -2.157 | -2.388 | 1.271 |
| 10 | 1.256 | -2.388 | -3.898 | -0.973 |
| 11 | -0.351 | -1.862 | -2.091 | 1.104 |
| 12 | -0.593 | -2.689 | 0.538 | 0.51 |
| 13 | -1.383 | 0.907 | -0.952 | -0.12 |
| 14 | 1.168 | -0.652 | -2.228 | -1.862 |
| 15 | 0.097 | -1.383 | -1.322 | 0.868 |
| 16 | 0.661 | -0.932 | -0.296 | -0.076 |