Model info
| Transcription factor | Pou3f2 | ||||||||
| Model | PO3F2_MOUSE.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 17 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | dbSWYMTGAATAWKbAW | ||||||||
| Best auROC (human) | 0.777 | ||||||||
| Best auROC (mouse) | 0.934 | ||||||||
| Peak sets in benchmark (human) | 12 | ||||||||
| Peak sets in benchmark (mouse) | 22 | ||||||||
| Aligned words | 284 | ||||||||
| TF family | POU domain factors {3.1.10} | ||||||||
| TF subfamily | POU3 (Oct-6-like factors) {3.1.10.3} | ||||||||
| MGI | MGI:101895 | ||||||||
| EntrezGene | GeneID:18992 (SSTAR profile) | ||||||||
| UniProt ID | PO3F2_MOUSE | ||||||||
| UniProt AC | P31360 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Pou3f2 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 90.0 | 35.0 | 115.0 | 44.0 |
| 02 | 43.0 | 54.0 | 61.0 | 126.0 |
| 03 | 14.0 | 138.0 | 102.0 | 30.0 |
| 04 | 65.0 | 40.0 | 13.0 | 166.0 |
| 05 | 20.0 | 216.0 | 7.0 | 41.0 |
| 06 | 215.0 | 40.0 | 1.0 | 28.0 |
| 07 | 11.0 | 1.0 | 6.0 | 266.0 |
| 08 | 8.0 | 0.0 | 276.0 | 0.0 |
| 09 | 187.0 | 95.0 | 2.0 | 0.0 |
| 10 | 281.0 | 0.0 | 0.0 | 3.0 |
| 11 | 0.0 | 0.0 | 0.0 | 284.0 |
| 12 | 244.0 | 1.0 | 28.0 | 11.0 |
| 13 | 56.0 | 49.0 | 5.0 | 174.0 |
| 14 | 26.0 | 6.0 | 48.0 | 204.0 |
| 15 | 12.0 | 154.0 | 72.0 | 46.0 |
| 16 | 229.0 | 50.0 | 2.0 | 3.0 |
| 17 | 94.0 | 6.0 | 14.0 | 170.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.233 | -0.687 | 0.475 | -0.467 |
| 02 | -0.489 | -0.268 | -0.149 | 0.565 |
| 03 | -1.547 | 0.655 | 0.356 | -0.835 |
| 04 | -0.086 | -0.559 | -1.614 | 0.838 |
| 05 | -1.218 | 1.099 | -2.153 | -0.535 |
| 06 | 1.095 | -0.559 | -3.402 | -0.901 |
| 07 | -1.764 | -3.402 | -2.279 | 1.306 |
| 08 | -2.04 | -3.937 | 1.343 | -3.937 |
| 09 | 0.956 | 0.286 | -3.055 | -3.937 |
| 10 | 1.361 | -3.937 | -3.937 | -2.798 |
| 11 | -3.937 | -3.937 | -3.937 | 1.372 |
| 12 | 1.221 | -3.402 | -0.901 | -1.764 |
| 13 | -0.232 | -0.362 | -2.424 | 0.885 |
| 14 | -0.971 | -2.279 | -0.382 | 1.043 |
| 15 | -1.686 | 0.764 | 0.014 | -0.423 |
| 16 | 1.157 | -0.342 | -3.055 | -2.798 |
| 17 | 0.276 | -2.279 | -1.547 | 0.862 |