We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPOU4F1
(GeneCards)
ModelPO4F1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length14
Quality
D
Motif rank
0
ConsensushATWAATTATTYAd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7624
TF familyPOU domain factors {3.1.10}
TF subfamilyPOU4 (Brn-3-like factors) {3.1.10.4}
HGNCHGNC:9218
EntrezGeneGeneID:5457
(SSTAR profile)
UniProt IDPO4F1_HUMAN
UniProt ACQ01851
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.72021
0.0005 5.01602
0.0001 7.6752650000000004
GTEx tissue expression atlas POU4F1 expression
ReMap ChIP-seq dataset list POU4F1 datasets
Motifs in JASPAR
PCM
ACGT
011830.53988.5683.51121.5
026475.75365.75389.75392.75
03159.75151.75147.757164.75
041698.75536.75436.754951.75
057235.015.043.0331.0
067221.053.030.0320.0
07717.036.041.06830.0
082417.033.012.05162.0
097591.03.00.030.0
1081.03.010.07530.0
1119.755.752173.755424.75
12969.54983.5218.51452.5
136700.75270.75307.75344.75
141047.75980.75992.754602.75
PWM
ACGT
01-0.040.738-1.023-0.53
021.222-1.646-1.583-1.575
03-2.466-2.517-2.5431.323
04-0.115-1.264-1.4690.954
051.333-4.707-3.742-1.745
061.331-3.542-4.081-1.779
07-0.976-3.91-3.7871.275
080.237-3.992-4.8980.996
091.381-5.899-6.75-4.081
10-3.132-5.899-5.051.373
11-4.464-5.4760.1311.045
12-0.6750.96-2.157-0.271
131.256-1.945-1.817-1.705
14-0.597-0.663-0.6510.881