We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPou5f1
ModelPO5F1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusbbhWTTSThATGYWRAWdn
Best auROC (human)0.984
Best auROC (mouse)0.988
Peak sets in benchmark (human)44
Peak sets in benchmark (mouse)119
Aligned words495
TF familyPOU domain factors {3.1.10}
TF subfamilyPOU5 (Oct-3/4-like factors) {3.1.10.5}
MGIMGI:101893
EntrezGeneGeneID:18999
(SSTAR profile)
UniProt IDPO5F1_MOUSE
UniProt ACP20263
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.395410000000002
0.0005 11.502410000000001
0.0001 15.92026
GTEx tissue expression atlas Pou5f1 expression
Motifs in JASPAR
MA0142.1 (Pou5f1::Sox2; Mus musculus)
MA1115.1 (POU5F1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
018.016.015.019.014.061.06.030.03.057.019.023.011.091.070.052.0
022.011.02.021.023.096.05.0101.05.046.07.052.016.062.019.027.0
0327.01.05.013.088.03.01.0123.018.01.01.013.0105.05.06.085.0
046.09.08.0215.00.01.00.09.01.01.00.011.05.010.04.0215.0
054.01.02.05.02.00.02.017.02.01.00.09.014.04.08.0424.0
062.04.014.02.03.03.00.00.04.04.03.01.041.0108.0278.028.0
0710.01.01.038.052.00.01.066.044.00.06.0245.09.00.01.021.0
0844.06.015.050.00.00.00.01.03.03.00.03.063.085.049.0173.0
09103.01.01.05.083.01.00.010.058.00.00.06.0196.03.017.011.0
101.04.02.0433.00.00.00.05.00.00.00.018.00.00.00.032.0
110.01.00.00.01.00.01.02.00.00.02.00.05.00.0422.061.0
120.05.00.01.00.01.00.00.06.0254.041.0124.02.040.02.019.0
131.00.02.05.0196.06.00.098.023.02.05.013.082.03.00.059.0
14195.011.061.035.04.00.01.06.06.00.00.01.0130.04.020.021.0
15316.04.011.04.011.00.02.02.078.01.02.01.040.06.08.09.0
1682.021.036.0306.05.04.00.02.012.04.02.05.05.04.00.07.0
1724.012.019.049.011.08.02.012.07.05.06.020.046.023.0129.0122.0
1813.021.028.026.020.08.06.014.058.017.036.045.053.033.046.071.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.318-0.648-0.711-0.48-0.7780.673-1.59-0.03-2.2240.605-0.48-0.292-1.0121.0710.810.514
02-2.574-1.012-2.574-0.382-0.2921.124-1.761.175-1.760.393-1.4450.514-0.6480.689-0.48-0.134
03-0.134-3.117-1.76-0.851.037-2.224-3.1171.371-0.533-3.117-3.117-0.851.213-1.76-1.591.003
04-1.59-1.205-1.3181.928-4.392-3.117-4.392-1.205-3.117-3.117-4.392-1.012-1.76-1.104-1.9661.928
05-1.966-3.117-2.574-1.76-2.574-4.392-2.574-0.589-2.574-3.117-4.392-1.205-0.778-1.966-1.3182.606
06-2.574-1.966-0.778-2.574-2.224-2.224-4.392-4.392-1.966-1.966-2.224-3.1170.2791.2412.185-0.098
07-1.104-3.117-3.1170.2030.514-4.392-3.1170.7510.349-4.392-1.592.058-1.205-4.392-3.117-0.382
080.349-1.59-0.7110.475-4.392-4.392-4.392-3.117-2.224-2.224-4.392-2.2240.7051.0030.4551.711
091.194-3.117-3.117-1.760.979-3.117-4.392-1.1040.623-4.392-4.392-1.591.836-2.224-0.589-1.012
10-3.117-1.966-2.5742.627-4.392-4.392-4.392-1.76-4.392-4.392-4.392-0.533-4.392-4.392-4.3920.033
11-4.392-3.117-4.392-4.392-3.117-4.392-3.117-2.574-4.392-4.392-2.574-4.392-1.76-4.3922.6010.673
12-4.392-1.76-4.392-3.117-4.392-3.117-4.392-4.392-1.592.0940.2791.379-2.5740.254-2.574-0.48
13-3.117-4.392-2.574-1.761.836-1.59-4.3921.144-0.292-2.574-1.76-0.850.967-2.224-4.3920.64
141.831-1.0120.6730.122-1.966-4.392-3.117-1.59-1.59-4.392-4.392-3.1171.426-1.966-0.429-0.382
152.313-1.966-1.012-1.966-1.012-4.392-2.574-2.5740.917-3.117-2.574-3.1170.254-1.59-1.318-1.205
160.967-0.3820.152.28-1.76-1.966-4.392-2.574-0.928-1.966-2.574-1.76-1.76-1.966-4.392-1.445
17-0.25-0.928-0.480.455-1.012-1.318-2.574-0.928-1.445-1.76-1.59-0.4290.393-0.2921.4181.363
18-0.85-0.382-0.098-0.172-0.429-1.318-1.59-0.7780.623-0.5890.150.3710.5330.0640.3930.824