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Model info
Transcription factorPou5f1
ModelPO5F1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusbbhWTTSThATGYWRAWdn
Best auROC (human)0.984
Best auROC (mouse)0.988
Peak sets in benchmark (human)44
Peak sets in benchmark (mouse)119
Aligned words495
TF familyPOU domain factors {3.1.10}
TF subfamilyPOU5 (Oct-3/4-like factors) {3.1.10.5}
MGIMGI:101893
EntrezGeneGeneID:18999
(SSTAR profile)
UniProt IDPO5F1_MOUSE
UniProt ACP20263
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.395410000000002
0.0005 11.502410000000001
0.0001 15.92026
GTEx tissue expression atlas Pou5f1 expression
Motifs in JASPAR
MA0142.1 (Pou5f1::Sox2; Mus musculus)
MA1115.1 (POU5F1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
018.016.015.019.014.061.06.030.03.057.019.023.011.091.070.052.0
022.011.02.021.023.096.05.0101.05.046.07.052.016.062.019.027.0
0327.01.05.013.088.03.01.0123.018.01.01.013.0105.05.06.085.0
046.09.08.0215.00.01.00.09.01.01.00.011.05.010.04.0215.0
054.01.02.05.02.00.02.017.02.01.00.09.014.04.08.0424.0
062.04.014.02.03.03.00.00.04.04.03.01.041.0108.0278.028.0
0710.01.01.038.052.00.01.066.044.00.06.0245.09.00.01.021.0
0844.06.015.050.00.00.00.01.03.03.00.03.063.085.049.0173.0
09103.01.01.05.083.01.00.010.058.00.00.06.0196.03.017.011.0
101.04.02.0433.00.00.00.05.00.00.00.018.00.00.00.032.0
110.01.00.00.01.00.01.02.00.00.02.00.05.00.0422.061.0
120.05.00.01.00.01.00.00.06.0254.041.0124.02.040.02.019.0
131.00.02.05.0196.06.00.098.023.02.05.013.082.03.00.059.0
14195.011.061.035.04.00.01.06.06.00.00.01.0130.04.020.021.0
15316.04.011.04.011.00.02.02.078.01.02.01.040.06.08.09.0
1682.021.036.0306.05.04.00.02.012.04.02.05.05.04.00.07.0
1724.012.019.049.011.08.02.012.07.05.06.020.046.023.0129.0122.0
1813.021.028.026.020.08.06.014.058.017.036.045.053.033.046.071.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.318-0.648-0.711-0.48-0.7780.673-1.59-0.03-2.2240.605-0.48-0.292-1.0121.0710.810.514
02-2.574-1.012-2.574-0.382-0.2921.124-1.761.175-1.760.393-1.4450.514-0.6480.689-0.48-0.134
03-0.134-3.117-1.76-0.851.037-2.224-3.1171.371-0.533-3.117-3.117-0.851.213-1.76-1.591.003
04-1.59-1.205-1.3181.928-4.392-3.117-4.392-1.205-3.117-3.117-4.392-1.012-1.76-1.104-1.9661.928
05-1.966-3.117-2.574-1.76-2.574-4.392-2.574-0.589-2.574-3.117-4.392-1.205-0.778-1.966-1.3182.606
06-2.574-1.966-0.778-2.574-2.224-2.224-4.392-4.392-1.966-1.966-2.224-3.1170.2791.2412.185-0.098
07-1.104-3.117-3.1170.2030.514-4.392-3.1170.7510.349-4.392-1.592.058-1.205-4.392-3.117-0.382
080.349-1.59-0.7110.475-4.392-4.392-4.392-3.117-2.224-2.224-4.392-2.2240.7051.0030.4551.711
091.194-3.117-3.117-1.760.979-3.117-4.392-1.1040.623-4.392-4.392-1.591.836-2.224-0.589-1.012
10-3.117-1.966-2.5742.627-4.392-4.392-4.392-1.76-4.392-4.392-4.392-0.533-4.392-4.392-4.3920.033
11-4.392-3.117-4.392-4.392-3.117-4.392-3.117-2.574-4.392-4.392-2.574-4.392-1.76-4.3922.6010.673
12-4.392-1.76-4.392-3.117-4.392-3.117-4.392-4.392-1.592.0940.2791.379-2.5740.254-2.574-0.48
13-3.117-4.392-2.574-1.761.836-1.59-4.3921.144-0.292-2.574-1.76-0.850.967-2.224-4.3920.64
141.831-1.0120.6730.122-1.966-4.392-3.117-1.59-1.59-4.392-4.392-3.1171.426-1.966-0.429-0.382
152.313-1.966-1.012-1.966-1.012-4.392-2.574-2.5740.917-3.117-2.574-3.1170.254-1.59-1.318-1.205
160.967-0.3820.152.28-1.76-1.966-4.392-2.574-0.928-1.966-2.574-1.76-1.76-1.966-4.392-1.445
17-0.25-0.928-0.480.455-1.012-1.318-2.574-0.928-1.445-1.76-1.59-0.4290.393-0.2921.4181.363
18-0.85-0.382-0.098-0.172-0.429-1.318-1.59-0.7780.623-0.5890.150.3710.5330.0640.3930.824