We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPOU6F1
(GeneCards)
ModelPO6F1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
D
Motif rank
0
ConsensusnATAATTTATGCR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words14
TF familyPOU domain factors {3.1.10}
TF subfamilyPOU6 (Brn-5-like factors) {3.1.10.6}
HGNCHGNC:9224
EntrezGeneGeneID:5463
(SSTAR profile)
UniProt IDPO6F1_HUMAN
UniProt ACQ14863
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.843465
0.0005 5.72772
0.0001 7.60996
GTEx tissue expression atlas POU6F1 expression
ReMap ChIP-seq dataset list POU6F1 datasets
Motifs in JASPAR
MA0628.1 (POU6F1; Homo sapiens)
PCM
ACGT
012.07.03.02.0
0213.01.00.00.0
030.00.00.014.0
0412.00.00.02.0
0514.00.00.00.0
065.00.00.09.0
070.02.00.012.0
080.00.00.014.0
0913.00.00.01.0
100.00.00.014.0
110.00.014.00.0
120.012.00.02.0
137.02.05.00.0
PWM
ACGT
01-0.4470.611-0.128-0.447
021.189-0.919-1.841-1.841
03-1.841-1.841-1.8411.26
041.113-1.841-1.841-0.447
051.26-1.841-1.841-1.841
060.308-1.841-1.8410.843
07-1.841-0.447-1.8411.113
08-1.841-1.841-1.8411.26
091.189-1.841-1.841-0.919
10-1.841-1.841-1.8411.26
11-1.841-1.8411.26-1.841
12-1.8411.113-1.841-0.447
130.611-0.4470.308-1.841