We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPOU6F2
(GeneCards)
ModelPO6F2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusdhTAATTAGbh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1481
TF familyPOU domain factors {3.1.10}
TF subfamilyPOU6 (Brn-5-like factors) {3.1.10.6}
HGNCHGNC:21694
EntrezGeneGeneID:11281
(SSTAR profile)
UniProt IDPO6F2_HUMAN
UniProt ACP78424
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.52984
0.0005 5.399675
0.0001 8.31268
GTEx tissue expression atlas POU6F2 expression
ReMap ChIP-seq dataset list POU6F2 datasets
Motifs in JASPAR
MA0793.1 (POU6F2; Homo sapiens)
PCM
ACGT
01253.544228.631543.228272.159
02412.741225.17196.444463.208
0326.63430.37220.4861220.07
041296.8980.00.6640.0
051293.8240.03.0740.664
060.00.07.7221289.84
073.7380.0469.756824.068
081267.7137.0156.35116.483
0931.28227.9621220.48817.83
1087.073572.96454.053183.477
11236.273282.95166.207612.132
PWM
ACGT
01-0.245-0.3480.513-0.175
020.24-0.363-0.4980.355
03-2.44-2.317-2.6841.321
041.382-5.204-4.889-5.204
051.379-5.204-4.205-4.889
06-5.204-5.204-3.5351.376
07-4.077-5.2040.3690.929
081.359-3.612-3.69-2.882
09-2.289-2.3941.321-2.811
10-1.30.5660.335-0.566
11-0.315-0.136-0.6640.632