We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPGR
(GeneCards)
ModelPRGR_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusnhbRKnACRKhYWGThYYhn
Best auROC (human)0.966
Best auROC (mouse)0.982
Peak sets in benchmark (human)51
Peak sets in benchmark (mouse)15
Aligned words513
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyGR-like receptors (NR3C) {2.1.1.1}
HGNCHGNC:8910
EntrezGeneGeneID:5241
(SSTAR profile)
UniProt IDPRGR_HUMAN
UniProt ACP06401
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.92046
0.0005 10.766760000000001
0.0001 14.66976
GTEx tissue expression atlas PGR expression
ReMap ChIP-seq dataset list PGR datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0132.035.020.047.050.056.01.033.032.051.011.017.036.043.017.019.0
0227.072.036.015.042.072.08.063.06.025.08.010.09.046.047.014.0
0330.03.045.06.0142.06.026.041.062.04.027.06.017.02.066.017.0
0416.01.0182.052.04.00.06.05.019.04.0121.020.01.01.065.03.0
0517.02.016.05.00.03.00.03.0144.071.093.066.04.013.08.055.0
06147.01.09.08.078.01.01.09.0105.06.03.03.080.037.03.09.0
073.0376.015.016.01.042.01.01.00.016.00.00.00.024.01.04.0
081.00.02.01.0339.018.059.042.09.01.06.01.04.00.015.02.0
0931.048.052.0222.01.04.00.014.02.010.07.063.02.04.09.031.0
1013.09.06.08.011.021.07.027.07.021.08.032.036.072.042.0180.0
110.052.012.03.00.086.01.036.01.050.08.04.02.0190.013.042.0
121.01.00.01.059.026.022.0271.04.03.03.024.09.05.00.071.0
131.02.069.01.04.04.026.01.022.01.02.00.019.018.0328.02.0
140.01.01.044.01.00.01.023.022.012.025.0366.01.00.00.03.0
156.06.03.09.03.02.00.08.01.019.00.07.049.0122.039.0226.0
166.043.02.08.011.0106.00.032.02.031.02.07.06.0203.04.037.0
173.013.02.07.019.0210.06.0148.02.04.00.02.05.040.012.027.0
187.03.07.012.082.057.02.0126.03.00.01.016.022.033.054.075.0
1914.017.036.047.036.021.013.023.07.013.017.027.024.070.091.044.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.0230.112-0.4390.4040.4650.578-3.1260.0540.0230.485-1.022-0.5990.140.316-0.599-0.49
02-0.1440.8280.14-0.7210.2930.828-1.3280.695-1.6-0.22-1.328-1.114-1.2150.3830.404-0.788
03-0.04-2.2340.361-1.61.504-1.6-0.1810.2690.679-1.975-0.144-1.6-0.599-2.5840.741-0.599
04-0.658-3.1261.7520.504-1.975-4.4-1.6-1.77-0.49-1.9751.345-0.439-3.126-3.1260.726-2.234
05-0.599-2.584-0.658-1.77-4.4-2.234-4.4-2.2341.5180.8141.0820.741-1.975-0.86-1.3280.56
061.539-3.126-1.215-1.3280.907-3.126-3.126-1.2151.203-1.6-2.234-2.2340.9320.167-2.234-1.215
07-2.2342.476-0.721-0.658-3.1260.293-3.126-3.126-4.4-0.658-4.4-4.4-4.4-0.26-3.126-1.975
08-3.126-4.4-2.584-3.1262.373-0.5430.630.293-1.215-3.126-1.6-3.126-1.975-4.4-0.721-2.584
09-0.0080.4250.5041.95-3.126-1.975-4.4-0.788-2.584-1.114-1.4540.695-2.584-1.975-1.215-0.008
10-0.86-1.215-1.6-1.328-1.022-0.392-1.454-0.144-1.454-0.392-1.3280.0230.140.8280.2931.741
11-4.40.504-0.938-2.234-4.41.004-3.1260.14-3.1260.465-1.328-1.975-2.5841.795-0.860.293
12-3.126-3.126-4.4-3.1260.63-0.181-0.3462.149-1.975-2.234-2.234-0.26-1.215-1.77-4.40.814
13-3.126-2.5840.785-3.126-1.975-1.975-0.181-3.126-0.346-3.126-2.584-4.4-0.49-0.5432.34-2.584
14-4.4-3.126-3.1260.339-3.126-4.4-3.126-0.302-0.346-0.938-0.222.449-3.126-4.4-4.4-2.234
15-1.6-1.6-2.234-1.215-2.234-2.584-4.4-1.328-3.126-0.49-4.4-1.4540.4451.3530.2191.968
16-1.60.316-2.584-1.328-1.0221.213-4.40.023-2.584-0.008-2.584-1.454-1.61.861-1.9750.167
17-2.234-0.86-2.584-1.454-0.491.895-1.61.545-2.584-1.975-4.4-2.584-1.770.244-0.938-0.144
18-1.454-2.234-1.454-0.9380.9570.595-2.5841.385-2.234-4.4-3.126-0.658-0.3460.0540.5420.868
19-0.788-0.5990.140.4040.14-0.392-0.86-0.302-1.454-0.86-0.599-0.144-0.260.81.0610.339