Model info
| Transcription factor | Pgr | ||||||||
| Model | PRGR_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 15 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | RGdACAvAvWGThCY | ||||||||
| Best auROC (human) | 0.962 | ||||||||
| Best auROC (mouse) | 0.975 | ||||||||
| Peak sets in benchmark (human) | 51 | ||||||||
| Peak sets in benchmark (mouse) | 15 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
| TF subfamily | GR-like receptors (NR3C) {2.1.1.1} | ||||||||
| MGI | MGI:97567 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | PRGR_MOUSE | ||||||||
| UniProt AC | Q00175 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Pgr expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 232.0 | 5.0 | 229.0 | 34.0 |
| 02 | 57.0 | 6.0 | 414.0 | 23.0 |
| 03 | 226.0 | 79.0 | 103.0 | 92.0 |
| 04 | 463.0 | 9.0 | 19.0 | 9.0 |
| 05 | 1.0 | 479.0 | 16.0 | 4.0 |
| 06 | 397.0 | 7.0 | 42.0 | 54.0 |
| 07 | 125.0 | 88.0 | 203.0 | 84.0 |
| 08 | 319.0 | 0.0 | 181.0 | 0.0 |
| 09 | 202.0 | 131.0 | 129.0 | 38.0 |
| 10 | 89.0 | 61.0 | 15.0 | 335.0 |
| 11 | 17.0 | 11.0 | 472.0 | 0.0 |
| 12 | 25.0 | 13.0 | 11.0 | 451.0 |
| 13 | 99.0 | 111.0 | 79.0 | 211.0 |
| 14 | 18.0 | 421.0 | 8.0 | 53.0 |
| 15 | 49.0 | 191.0 | 15.0 | 245.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.613 | -2.961 | 0.6 | -1.27 |
| 02 | -0.771 | -2.819 | 1.189 | -1.64 |
| 03 | 0.587 | -0.452 | -0.191 | -0.302 |
| 04 | 1.3 | -2.484 | -1.818 | -2.484 |
| 05 | -3.903 | 1.334 | -1.975 | -3.126 |
| 06 | 1.147 | -2.694 | -1.067 | -0.823 |
| 07 | 0.0 | -0.346 | 0.48 | -0.392 |
| 08 | 0.929 | -4.4 | 0.366 | -4.4 |
| 09 | 0.475 | 0.046 | 0.031 | -1.163 |
| 10 | -0.335 | -0.705 | -2.034 | 0.978 |
| 11 | -1.92 | -2.311 | 1.32 | -4.4 |
| 12 | -1.561 | -2.163 | -2.311 | 1.274 |
| 13 | -0.23 | -0.117 | -0.452 | 0.519 |
| 14 | -1.868 | 1.206 | -2.584 | -0.841 |
| 15 | -0.918 | 0.42 | -2.034 | 0.667 |