We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPRRX2
(GeneCards)
ModelPRRX2_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length7
Quality
C
Motif rank
0
ConsensushTAATTR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words65
TF familyPaired-related HD factors {3.1.3}
TF subfamilyPRRX {3.1.3.21}
HGNCHGNC:21338
EntrezGeneGeneID:51450
(SSTAR profile)
UniProt IDPRRX2_HUMAN
UniProt ACQ99811
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.31537
0.0005 6.82732
0.0001 7.6565
GTEx tissue expression atlas PRRX2 expression
ReMap ChIP-seq dataset list PRRX2 datasets
Motifs in JASPAR
PCM
ACGT
0110.2518.254.2526.25
020.00.00.059.0
0359.00.00.00.0
0458.00.01.00.0
051.01.00.057.0
060.03.03.053.0
0727.01.029.02.0
PWM
ACGT
01-0.3360.2-1.0960.548
02-2.739-2.739-2.7391.337
031.337-2.739-2.739-2.739
041.32-2.739-2.055-2.739
05-2.055-2.055-2.7391.303
06-2.739-1.367-1.3671.231
070.575-2.0550.644-1.653